Gene : Medtr3g109925 M. truncatula Mt4.0v1
Defline:  (1 of 1) 3.6.4.9 - Chaperonin ATPase / Chaperonin Description:  TCP-1/cpn60 chaperonin family protein
Genomic Order:  6118 Name:  ? Medtr3g109925
Secondary Identifier:  ? PAC:31058371
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g109925 0.5kb upstream 0.5kb upstream 2532 true chr3: 50700177-50702708 Medicago truncatula
Medtr3g109925 0.5kb upstream 0.5kb upstream 500 false chr3: 50700177-50700676 Medicago truncatula
Medtr3g109925 0.5kb downstream 0.5kb downstream 2532 true chr3: 50700677-50703208 Medicago truncatula
Medtr3g109925 0.5kb downstream 0.5kb downstream 500 false chr3: 50702709-50703208 Medicago truncatula
Medtr3g109925 1.0kb upstream 1.0kb upstream 3032 true chr3: 50699677-50702708 Medicago truncatula
Medtr3g109925 1.0kb upstream 1.0kb upstream 1000 false chr3: 50699677-50700676 Medicago truncatula
Medtr3g109925 1.0kb downstream 1.0kb downstream 3032 true chr3: 50700677-50703708 Medicago truncatula
Medtr3g109925 1.0kb downstream 1.0kb downstream 1000 false chr3: 50702709-50703708 Medicago truncatula
Medtr3g109925 2.0kb upstream 2.0kb upstream 4032 true chr3: 50698677-50702708 Medicago truncatula
Medtr3g109925 2.0kb upstream 2.0kb upstream 2000 false chr3: 50698677-50700676 Medicago truncatula
Medtr3g109925 2.0kb downstream 2.0kb downstream 4032 true chr3: 50700677-50704708 Medicago truncatula
Medtr3g109925 2.0kb downstream 2.0kb downstream 2000 false chr3: 50702709-50704708 Medicago truncatula
Medtr3g109925 5.0kb upstream 5.0kb upstream 7032 true chr3: 50695677-50702708 Medicago truncatula
Medtr3g109925 5.0kb upstream 5.0kb upstream 5000 false chr3: 50695677-50700676 Medicago truncatula
Medtr3g109925 5.0kb downstream 5.0kb downstream 7032 true chr3: 50700677-50707708 Medicago truncatula
Medtr3g109925 5.0kb downstream 5.0kb downstream 5000 false chr3: 50702709-50707708 Medicago truncatula
Medtr3g109925 10.0kb upstream 10.0kb upstream 12032 true chr3: 50690677-50702708 Medicago truncatula
Medtr3g109925 10.0kb upstream 10.0kb upstream 10000 false chr3: 50690677-50700676 Medicago truncatula
Medtr3g109925 10.0kb downstream 10.0kb downstream 12032 true chr3: 50700677-50712708 Medicago truncatula
Medtr3g109925 10.0kb downstream 10.0kb downstream 10000 false chr3: 50702709-50712708 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041248 5273 Angiosperm View MSA
122305362 5265 Fabidae View MSA
124061732 5270 Rosid View MSA
123744760 5271 Pentapetalae View MSA
122793416 5272 Eudicot View MSA
121345664 5274 Embryophyte View MSA
123424288 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.765       Low
cufflinks 13.423     High  
cufflinks 10.355     High  
cufflinks 12.257     High  
cufflinks 18.299     High High
cufflinks 4.702       Low
cufflinks 9.095        
cufflinks 10.942     High  
cufflinks 20.275     High High

0 Strain