Gene : Medtr3g109900 M. truncatula Mt4.0v1
Defline:  (1 of 50) PF05553 - Cotton fibre expressed protein (DUF761) Description:  DUF761 domain protein
Genomic Order:  6219 Name:  ? Medtr3g109900
Secondary Identifier:  ? PAC:31054820
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g109900 0.5kb upstream 0.5kb upstream 1334 true chr3: 51412659-51413992 Medicago truncatula
Medtr3g109900 0.5kb upstream 0.5kb upstream 500 false chr3: 51412659-51413158 Medicago truncatula
Medtr3g109900 0.5kb downstream 0.5kb downstream 1334 true chr3: 51413159-51414492 Medicago truncatula
Medtr3g109900 0.5kb downstream 0.5kb downstream 500 false chr3: 51413993-51414492 Medicago truncatula
Medtr3g109900 1.0kb upstream 1.0kb upstream 1834 true chr3: 51412159-51413992 Medicago truncatula
Medtr3g109900 1.0kb upstream 1.0kb upstream 1000 false chr3: 51412159-51413158 Medicago truncatula
Medtr3g109900 1.0kb downstream 1.0kb downstream 1834 true chr3: 51413159-51414992 Medicago truncatula
Medtr3g109900 1.0kb downstream 1.0kb downstream 1000 false chr3: 51413993-51414992 Medicago truncatula
Medtr3g109900 2.0kb upstream 2.0kb upstream 2834 true chr3: 51411159-51413992 Medicago truncatula
Medtr3g109900 2.0kb upstream 2.0kb upstream 2000 false chr3: 51411159-51413158 Medicago truncatula
Medtr3g109900 2.0kb downstream 2.0kb downstream 2834 true chr3: 51413159-51415992 Medicago truncatula
Medtr3g109900 2.0kb downstream 2.0kb downstream 2000 false chr3: 51413993-51415992 Medicago truncatula
Medtr3g109900 5.0kb upstream 5.0kb upstream 5834 true chr3: 51408159-51413992 Medicago truncatula
Medtr3g109900 5.0kb upstream 5.0kb upstream 5000 false chr3: 51408159-51413158 Medicago truncatula
Medtr3g109900 5.0kb downstream 5.0kb downstream 5834 true chr3: 51413159-51418992 Medicago truncatula
Medtr3g109900 5.0kb downstream 5.0kb downstream 5000 false chr3: 51413993-51418992 Medicago truncatula
Medtr3g109900 10.0kb upstream 10.0kb upstream 10834 true chr3: 51403159-51413992 Medicago truncatula
Medtr3g109900 10.0kb upstream 10.0kb upstream 10000 false chr3: 51403159-51413158 Medicago truncatula
Medtr3g109900 10.0kb downstream 10.0kb downstream 10834 true chr3: 51413159-51423992 Medicago truncatula
Medtr3g109900 10.0kb downstream 10.0kb downstream 10000 false chr3: 51413993-51423992 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121672944 5273 Angiosperm View MSA
122303599 5265 Fabidae View MSA
124071792 5270 Rosid View MSA
123628050 5271 Pentapetalae View MSA
122662361 5272 Eudicot View MSA
120944849 5274 Embryophyte View MSA
122985259 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94        
cufflinks 0.151        
cufflinks 0.109       Low
cufflinks 29.035     High High
cufflinks 0.136        
cufflinks 7.36        
cufflinks 14.546     High  
cufflinks 0.101       Low
cufflinks 26.041     High High

0 Strain