Gene : Medtr3g110330 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23406:SF31 - NADP-DEPENDENT MALIC ENZYME 2-RELATED Description:  NADP-dependent malic enzyme-like protein
Genomic Order:  6230 Name:  ? Medtr3g110330
Secondary Identifier:  ? PAC:31059557
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLUCONEO-PWY Medicago truncatula pathologic  
Mtruncatula PWY-241 Medicago truncatula pathologic  
Mtruncatula PWY-7117 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g110330 0.5kb upstream 0.5kb upstream 5618 true chr3: 51494942-51500559 Medicago truncatula
Medtr3g110330 0.5kb upstream 0.5kb upstream 500 false chr3: 51494942-51495441 Medicago truncatula
Medtr3g110330 0.5kb downstream 0.5kb downstream 5618 true chr3: 51495442-51501059 Medicago truncatula
Medtr3g110330 0.5kb downstream 0.5kb downstream 500 false chr3: 51500560-51501059 Medicago truncatula
Medtr3g110330 1.0kb upstream 1.0kb upstream 6118 true chr3: 51494442-51500559 Medicago truncatula
Medtr3g110330 1.0kb upstream 1.0kb upstream 1000 false chr3: 51494442-51495441 Medicago truncatula
Medtr3g110330 1.0kb downstream 1.0kb downstream 6118 true chr3: 51495442-51501559 Medicago truncatula
Medtr3g110330 1.0kb downstream 1.0kb downstream 1000 false chr3: 51500560-51501559 Medicago truncatula
Medtr3g110330 2.0kb upstream 2.0kb upstream 7118 true chr3: 51493442-51500559 Medicago truncatula
Medtr3g110330 2.0kb upstream 2.0kb upstream 2000 false chr3: 51493442-51495441 Medicago truncatula
Medtr3g110330 2.0kb downstream 2.0kb downstream 7118 true chr3: 51495442-51502559 Medicago truncatula
Medtr3g110330 2.0kb downstream 2.0kb downstream 2000 false chr3: 51500560-51502559 Medicago truncatula
Medtr3g110330 5.0kb upstream 5.0kb upstream 10118 true chr3: 51490442-51500559 Medicago truncatula
Medtr3g110330 5.0kb upstream 5.0kb upstream 5000 false chr3: 51490442-51495441 Medicago truncatula
Medtr3g110330 5.0kb downstream 5.0kb downstream 10118 true chr3: 51495442-51505559 Medicago truncatula
Medtr3g110330 5.0kb downstream 5.0kb downstream 5000 false chr3: 51500560-51505559 Medicago truncatula
Medtr3g110330 10.0kb upstream 10.0kb upstream 15118 true chr3: 51485442-51500559 Medicago truncatula
Medtr3g110330 10.0kb upstream 10.0kb upstream 10000 false chr3: 51485442-51495441 Medicago truncatula
Medtr3g110330 10.0kb downstream 10.0kb downstream 15118 true chr3: 51495442-51510559 Medicago truncatula
Medtr3g110330 10.0kb downstream 10.0kb downstream 10000 false chr3: 51500560-51510559 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306748 5265 Fabidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.425       Low
cufflinks 14.191     High High
cufflinks 4.095        
cufflinks 0.254       Low
cufflinks 9.796       High
cufflinks 0.394       Low
cufflinks 2.481        
cufflinks 5.38        
cufflinks 1.416        

0 Strain