Gene : Medtr3g110142 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10896//PTHR10896:SF27 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE Description:  beta-1,4-xylosyltransferase, putative
Genomic Order:  6178 Name:  ? Medtr3g110142
Secondary Identifier:  ? PAC:31058360
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5800 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g110142 0.5kb upstream 0.5kb upstream 3890 true chr3: 51103709-51107598 Medicago truncatula
Medtr3g110142 0.5kb upstream 0.5kb upstream 500 false chr3: 51103709-51104208 Medicago truncatula
Medtr3g110142 0.5kb downstream 0.5kb downstream 3890 true chr3: 51104209-51108098 Medicago truncatula
Medtr3g110142 0.5kb downstream 0.5kb downstream 500 false chr3: 51107599-51108098 Medicago truncatula
Medtr3g110142 1.0kb upstream 1.0kb upstream 4390 true chr3: 51103209-51107598 Medicago truncatula
Medtr3g110142 1.0kb upstream 1.0kb upstream 1000 false chr3: 51103209-51104208 Medicago truncatula
Medtr3g110142 1.0kb downstream 1.0kb downstream 4390 true chr3: 51104209-51108598 Medicago truncatula
Medtr3g110142 1.0kb downstream 1.0kb downstream 1000 false chr3: 51107599-51108598 Medicago truncatula
Medtr3g110142 2.0kb upstream 2.0kb upstream 5390 true chr3: 51102209-51107598 Medicago truncatula
Medtr3g110142 2.0kb upstream 2.0kb upstream 2000 false chr3: 51102209-51104208 Medicago truncatula
Medtr3g110142 2.0kb downstream 2.0kb downstream 5390 true chr3: 51104209-51109598 Medicago truncatula
Medtr3g110142 2.0kb downstream 2.0kb downstream 2000 false chr3: 51107599-51109598 Medicago truncatula
Medtr3g110142 5.0kb upstream 5.0kb upstream 8390 true chr3: 51099209-51107598 Medicago truncatula
Medtr3g110142 5.0kb upstream 5.0kb upstream 5000 false chr3: 51099209-51104208 Medicago truncatula
Medtr3g110142 5.0kb downstream 5.0kb downstream 8390 true chr3: 51104209-51112598 Medicago truncatula
Medtr3g110142 5.0kb downstream 5.0kb downstream 5000 false chr3: 51107599-51112598 Medicago truncatula
Medtr3g110142 10.0kb upstream 10.0kb upstream 13390 true chr3: 51094209-51107598 Medicago truncatula
Medtr3g110142 10.0kb upstream 10.0kb upstream 10000 false chr3: 51094209-51104208 Medicago truncatula
Medtr3g110142 10.0kb downstream 10.0kb downstream 13390 true chr3: 51104209-51117598 Medicago truncatula
Medtr3g110142 10.0kb downstream 10.0kb downstream 10000 false chr3: 51107599-51117598 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308120 5265 Fabidae View MSA
124070512 5270 Rosid View MSA
123748669 5271 Pentapetalae View MSA
122794067 5272 Eudicot View MSA
122050395 5273 Angiosperm View MSA
121346281 5274 Embryophyte View MSA
123380360 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.323        
cufflinks 0.808        
cufflinks 0.728        
cufflinks 0.069       Low
cufflinks 1.44       High
cufflinks 0.095     Low  
cufflinks 0.102        
cufflinks 0.678        
cufflinks 0.1        

0 Strain