Gene : Medtr3g110108 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13856:SF78 - ENTH/VHS/GAT FAMILY PROTEIN Description:  ENTH/VHS/GAT family protein
Genomic Order:  6168 Name:  ? Medtr3g110108
Secondary Identifier:  ? PAC:31056188
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g110108 0.5kb upstream 0.5kb upstream 8259 true chr3: 51017737-51025995 Medicago truncatula
Medtr3g110108 0.5kb upstream 0.5kb upstream 500 false chr3: 51017737-51018236 Medicago truncatula
Medtr3g110108 0.5kb downstream 0.5kb downstream 8259 true chr3: 51018237-51026495 Medicago truncatula
Medtr3g110108 0.5kb downstream 0.5kb downstream 500 false chr3: 51025996-51026495 Medicago truncatula
Medtr3g110108 1.0kb upstream 1.0kb upstream 8759 true chr3: 51017237-51025995 Medicago truncatula
Medtr3g110108 1.0kb upstream 1.0kb upstream 1000 false chr3: 51017237-51018236 Medicago truncatula
Medtr3g110108 1.0kb downstream 1.0kb downstream 8759 true chr3: 51018237-51026995 Medicago truncatula
Medtr3g110108 1.0kb downstream 1.0kb downstream 1000 false chr3: 51025996-51026995 Medicago truncatula
Medtr3g110108 2.0kb upstream 2.0kb upstream 9759 true chr3: 51016237-51025995 Medicago truncatula
Medtr3g110108 2.0kb upstream 2.0kb upstream 2000 false chr3: 51016237-51018236 Medicago truncatula
Medtr3g110108 2.0kb downstream 2.0kb downstream 9759 true chr3: 51018237-51027995 Medicago truncatula
Medtr3g110108 2.0kb downstream 2.0kb downstream 2000 false chr3: 51025996-51027995 Medicago truncatula
Medtr3g110108 5.0kb upstream 5.0kb upstream 12759 true chr3: 51013237-51025995 Medicago truncatula
Medtr3g110108 5.0kb upstream 5.0kb upstream 5000 false chr3: 51013237-51018236 Medicago truncatula
Medtr3g110108 5.0kb downstream 5.0kb downstream 12759 true chr3: 51018237-51030995 Medicago truncatula
Medtr3g110108 5.0kb downstream 5.0kb downstream 5000 false chr3: 51025996-51030995 Medicago truncatula
Medtr3g110108 10.0kb upstream 10.0kb upstream 17759 true chr3: 51008237-51025995 Medicago truncatula
Medtr3g110108 10.0kb upstream 10.0kb upstream 10000 false chr3: 51008237-51018236 Medicago truncatula
Medtr3g110108 10.0kb downstream 10.0kb downstream 17759 true chr3: 51018237-51035995 Medicago truncatula
Medtr3g110108 10.0kb downstream 10.0kb downstream 10000 false chr3: 51025996-51035995 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312607 5265 Fabidae View MSA
124064197 5270 Rosid View MSA
123738981 5271 Pentapetalae View MSA
122792508 5272 Eudicot View MSA
122051153 5273 Angiosperm View MSA
121349159 5274 Embryophyte View MSA
123427882 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.087       High
cufflinks 0.043     Low  
cufflinks 0.056     Low  
cufflinks 0.082        
cufflinks 0.096        
cufflinks 0.039     Low  
cufflinks 0.146        
cufflinks 0.043     Low  
cufflinks 0.347       High

0 Strain