Gene : Medtr3g111320 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF03040 - CemA family (CemA) Description:  envelope membrane protein
Genomic Order:  6290 Name:  ? Medtr3g111320
Secondary Identifier:  ? PAC:31058994
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g111320 0.5kb upstream 0.5kb upstream 902 true chr3: 52018178-52019079 Medicago truncatula
Medtr3g111320 0.5kb upstream 0.5kb upstream 500 false chr3: 52018580-52019079 Medicago truncatula
Medtr3g111320 0.5kb downstream 0.5kb downstream 902 true chr3: 52017678-52018579 Medicago truncatula
Medtr3g111320 0.5kb downstream 0.5kb downstream 500 false chr3: 52017678-52018177 Medicago truncatula
Medtr3g111320 1.0kb upstream 1.0kb upstream 1402 true chr3: 52018178-52019579 Medicago truncatula
Medtr3g111320 1.0kb upstream 1.0kb upstream 1000 false chr3: 52018580-52019579 Medicago truncatula
Medtr3g111320 1.0kb downstream 1.0kb downstream 1402 true chr3: 52017178-52018579 Medicago truncatula
Medtr3g111320 1.0kb downstream 1.0kb downstream 1000 false chr3: 52017178-52018177 Medicago truncatula
Medtr3g111320 2.0kb upstream 2.0kb upstream 2402 true chr3: 52018178-52020579 Medicago truncatula
Medtr3g111320 2.0kb upstream 2.0kb upstream 2000 false chr3: 52018580-52020579 Medicago truncatula
Medtr3g111320 2.0kb downstream 2.0kb downstream 2402 true chr3: 52016178-52018579 Medicago truncatula
Medtr3g111320 2.0kb downstream 2.0kb downstream 2000 false chr3: 52016178-52018177 Medicago truncatula
Medtr3g111320 5.0kb upstream 5.0kb upstream 5402 true chr3: 52018178-52023579 Medicago truncatula
Medtr3g111320 5.0kb upstream 5.0kb upstream 5000 false chr3: 52018580-52023579 Medicago truncatula
Medtr3g111320 5.0kb downstream 5.0kb downstream 5402 true chr3: 52013178-52018579 Medicago truncatula
Medtr3g111320 5.0kb downstream 5.0kb downstream 5000 false chr3: 52013178-52018177 Medicago truncatula
Medtr3g111320 10.0kb upstream 10.0kb upstream 10402 true chr3: 52018178-52028579 Medicago truncatula
Medtr3g111320 10.0kb upstream 10.0kb upstream 10000 false chr3: 52018580-52028579 Medicago truncatula
Medtr3g111320 10.0kb downstream 10.0kb downstream 10402 true chr3: 52008178-52018579 Medicago truncatula
Medtr3g111320 10.0kb downstream 10.0kb downstream 10000 false chr3: 52008178-52018177 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029220 5273 Angiosperm View MSA
122288238 5265 Fabidae View MSA
124028574 5270 Rosid View MSA
123751170 5271 Pentapetalae View MSA
122789805 5272 Eudicot View MSA
121346072 5274 Embryophyte View MSA
123427516 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.192        
cufflinks 0.315        
cufflinks 0.353        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.428       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.133        
cufflinks 0.086       Low
cufflinks 0.347        

0 Strain