Gene : Medtr3g111290 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31945:SF6 - TRANSCRIPTION FACTOR BHLH61-RELATED Description:  BHLH transcriptional factor
Genomic Order:  6287 Name:  ? Medtr3g111290
Secondary Identifier:  ? PAC:31055553
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g111290 0.5kb upstream 0.5kb upstream 2778 true chr3: 52001507-52004284 Medicago truncatula
Medtr3g111290 0.5kb upstream 0.5kb upstream 500 false chr3: 52003785-52004284 Medicago truncatula
Medtr3g111290 0.5kb downstream 0.5kb downstream 2778 true chr3: 52001007-52003784 Medicago truncatula
Medtr3g111290 0.5kb downstream 0.5kb downstream 500 false chr3: 52001007-52001506 Medicago truncatula
Medtr3g111290 1.0kb upstream 1.0kb upstream 3278 true chr3: 52001507-52004784 Medicago truncatula
Medtr3g111290 1.0kb upstream 1.0kb upstream 1000 false chr3: 52003785-52004784 Medicago truncatula
Medtr3g111290 1.0kb downstream 1.0kb downstream 3278 true chr3: 52000507-52003784 Medicago truncatula
Medtr3g111290 1.0kb downstream 1.0kb downstream 1000 false chr3: 52000507-52001506 Medicago truncatula
Medtr3g111290 2.0kb upstream 2.0kb upstream 4278 true chr3: 52001507-52005784 Medicago truncatula
Medtr3g111290 2.0kb upstream 2.0kb upstream 2000 false chr3: 52003785-52005784 Medicago truncatula
Medtr3g111290 2.0kb downstream 2.0kb downstream 4278 true chr3: 51999507-52003784 Medicago truncatula
Medtr3g111290 2.0kb downstream 2.0kb downstream 2000 false chr3: 51999507-52001506 Medicago truncatula
Medtr3g111290 5.0kb upstream 5.0kb upstream 7278 true chr3: 52001507-52008784 Medicago truncatula
Medtr3g111290 5.0kb upstream 5.0kb upstream 5000 false chr3: 52003785-52008784 Medicago truncatula
Medtr3g111290 5.0kb downstream 5.0kb downstream 7278 true chr3: 51996507-52003784 Medicago truncatula
Medtr3g111290 5.0kb downstream 5.0kb downstream 5000 false chr3: 51996507-52001506 Medicago truncatula
Medtr3g111290 10.0kb upstream 10.0kb upstream 12278 true chr3: 52001507-52013784 Medicago truncatula
Medtr3g111290 10.0kb upstream 10.0kb upstream 10000 false chr3: 52003785-52013784 Medicago truncatula
Medtr3g111290 10.0kb downstream 10.0kb downstream 12278 true chr3: 51991507-52003784 Medicago truncatula
Medtr3g111290 10.0kb downstream 10.0kb downstream 10000 false chr3: 51991507-52001506 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310483 5265 Fabidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.199        
cufflinks 1.004       Low
cufflinks 1.209        
cufflinks 5.744       High
cufflinks 2.126        
cufflinks 1.241        
cufflinks 7.834       High
cufflinks 1.058       Low
cufflinks 6.34       High

0 Strain