Gene : Medtr3g111060 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10896:SF20 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE I Description:  beta-1,4-xylosyltransferase, putative
Genomic Order:  6273 Name:  ? Medtr3g111060
Secondary Identifier:  ? PAC:31060803
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5800 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g111060 0.5kb upstream 0.5kb upstream 4527 true chr3: 51891478-51896004 Medicago truncatula
Medtr3g111060 0.5kb upstream 0.5kb upstream 500 false chr3: 51891478-51891977 Medicago truncatula
Medtr3g111060 0.5kb downstream 0.5kb downstream 4527 true chr3: 51891978-51896504 Medicago truncatula
Medtr3g111060 0.5kb downstream 0.5kb downstream 500 false chr3: 51896005-51896504 Medicago truncatula
Medtr3g111060 1.0kb upstream 1.0kb upstream 5027 true chr3: 51890978-51896004 Medicago truncatula
Medtr3g111060 1.0kb upstream 1.0kb upstream 1000 false chr3: 51890978-51891977 Medicago truncatula
Medtr3g111060 1.0kb downstream 1.0kb downstream 5027 true chr3: 51891978-51897004 Medicago truncatula
Medtr3g111060 1.0kb downstream 1.0kb downstream 1000 false chr3: 51896005-51897004 Medicago truncatula
Medtr3g111060 2.0kb upstream 2.0kb upstream 6027 true chr3: 51889978-51896004 Medicago truncatula
Medtr3g111060 2.0kb upstream 2.0kb upstream 2000 false chr3: 51889978-51891977 Medicago truncatula
Medtr3g111060 2.0kb downstream 2.0kb downstream 6027 true chr3: 51891978-51898004 Medicago truncatula
Medtr3g111060 2.0kb downstream 2.0kb downstream 2000 false chr3: 51896005-51898004 Medicago truncatula
Medtr3g111060 5.0kb upstream 5.0kb upstream 9027 true chr3: 51886978-51896004 Medicago truncatula
Medtr3g111060 5.0kb upstream 5.0kb upstream 5000 false chr3: 51886978-51891977 Medicago truncatula
Medtr3g111060 5.0kb downstream 5.0kb downstream 9027 true chr3: 51891978-51901004 Medicago truncatula
Medtr3g111060 5.0kb downstream 5.0kb downstream 5000 false chr3: 51896005-51901004 Medicago truncatula
Medtr3g111060 10.0kb upstream 10.0kb upstream 14027 true chr3: 51881978-51896004 Medicago truncatula
Medtr3g111060 10.0kb upstream 10.0kb upstream 10000 false chr3: 51881978-51891977 Medicago truncatula
Medtr3g111060 10.0kb downstream 10.0kb downstream 14027 true chr3: 51891978-51906004 Medicago truncatula
Medtr3g111060 10.0kb downstream 10.0kb downstream 10000 false chr3: 51896005-51906004 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302440 5265 Fabidae View MSA
124065627 5270 Rosid View MSA
123748669 5271 Pentapetalae View MSA
122794067 5272 Eudicot View MSA
122050395 5273 Angiosperm View MSA
121346281 5274 Embryophyte View MSA
123380360 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.572        
cufflinks 7.076        
cufflinks 7.708        
cufflinks 6.262        
cufflinks 7.435        
cufflinks 3.628       Low
cufflinks 7.306        
cufflinks 6.424        
cufflinks 6.927        

0 Strain