Gene : Medtr3g112070 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22572:SF110 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 2, CHLOROPLASTIC Description:  glucose-1-phosphate adenylyltransferase family protein
Genomic Order:  6349 Name:  ? Medtr3g112070
Secondary Identifier:  ? PAC:31060232
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLYCOGENSYNTH-PWY Medicago truncatula pathologic  
Mtruncatula PWY-622 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g112070 0.5kb upstream 0.5kb upstream 4540 true chr3: 52437380-52441919 Medicago truncatula
Medtr3g112070 0.5kb upstream 0.5kb upstream 500 false chr3: 52441420-52441919 Medicago truncatula
Medtr3g112070 0.5kb downstream 0.5kb downstream 4540 true chr3: 52436880-52441419 Medicago truncatula
Medtr3g112070 0.5kb downstream 0.5kb downstream 500 false chr3: 52436880-52437379 Medicago truncatula
Medtr3g112070 1.0kb upstream 1.0kb upstream 5040 true chr3: 52437380-52442419 Medicago truncatula
Medtr3g112070 1.0kb upstream 1.0kb upstream 1000 false chr3: 52441420-52442419 Medicago truncatula
Medtr3g112070 1.0kb downstream 1.0kb downstream 5040 true chr3: 52436380-52441419 Medicago truncatula
Medtr3g112070 1.0kb downstream 1.0kb downstream 1000 false chr3: 52436380-52437379 Medicago truncatula
Medtr3g112070 2.0kb upstream 2.0kb upstream 6040 true chr3: 52437380-52443419 Medicago truncatula
Medtr3g112070 2.0kb upstream 2.0kb upstream 2000 false chr3: 52441420-52443419 Medicago truncatula
Medtr3g112070 2.0kb downstream 2.0kb downstream 6040 true chr3: 52435380-52441419 Medicago truncatula
Medtr3g112070 2.0kb downstream 2.0kb downstream 2000 false chr3: 52435380-52437379 Medicago truncatula
Medtr3g112070 5.0kb upstream 5.0kb upstream 9040 true chr3: 52437380-52446419 Medicago truncatula
Medtr3g112070 5.0kb upstream 5.0kb upstream 5000 false chr3: 52441420-52446419 Medicago truncatula
Medtr3g112070 5.0kb downstream 5.0kb downstream 9040 true chr3: 52432380-52441419 Medicago truncatula
Medtr3g112070 5.0kb downstream 5.0kb downstream 5000 false chr3: 52432380-52437379 Medicago truncatula
Medtr3g112070 10.0kb upstream 10.0kb upstream 14040 true chr3: 52437380-52451419 Medicago truncatula
Medtr3g112070 10.0kb upstream 10.0kb upstream 10000 false chr3: 52441420-52451419 Medicago truncatula
Medtr3g112070 10.0kb downstream 10.0kb downstream 14040 true chr3: 52427380-52441419 Medicago truncatula
Medtr3g112070 10.0kb downstream 10.0kb downstream 10000 false chr3: 52427380-52437379 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302213 5265 Fabidae View MSA
124063067 5270 Rosid View MSA
123736648 5271 Pentapetalae View MSA
122795851 5272 Eudicot View MSA
122049948 5273 Angiosperm View MSA
121348030 5274 Embryophyte View MSA
123424085 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.684     High High
cufflinks 4.075        
cufflinks 3.918        
cufflinks 1.991        
cufflinks 4.694        
cufflinks 1.563       Low
cufflinks 4.449        
cufflinks 3.584        
cufflinks 4.027        

0 Strain