Gene : Medtr3g111780 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33057:SF28 - OVATE FAMILY PROTEIN 7 Description:  ovate transcriptional repressor
Genomic Order:  6324 Name:  ? Medtr3g111780
Secondary Identifier:  ? PAC:31060562
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g111780 0.5kb upstream 0.5kb upstream 1598 true chr3: 52289425-52291022 Medicago truncatula
Medtr3g111780 0.5kb upstream 0.5kb upstream 500 false chr3: 52290523-52291022 Medicago truncatula
Medtr3g111780 0.5kb downstream 0.5kb downstream 1598 true chr3: 52288925-52290522 Medicago truncatula
Medtr3g111780 0.5kb downstream 0.5kb downstream 500 false chr3: 52288925-52289424 Medicago truncatula
Medtr3g111780 1.0kb upstream 1.0kb upstream 2098 true chr3: 52289425-52291522 Medicago truncatula
Medtr3g111780 1.0kb upstream 1.0kb upstream 1000 false chr3: 52290523-52291522 Medicago truncatula
Medtr3g111780 1.0kb downstream 1.0kb downstream 2098 true chr3: 52288425-52290522 Medicago truncatula
Medtr3g111780 1.0kb downstream 1.0kb downstream 1000 false chr3: 52288425-52289424 Medicago truncatula
Medtr3g111780 2.0kb upstream 2.0kb upstream 3098 true chr3: 52289425-52292522 Medicago truncatula
Medtr3g111780 2.0kb upstream 2.0kb upstream 2000 false chr3: 52290523-52292522 Medicago truncatula
Medtr3g111780 2.0kb downstream 2.0kb downstream 3098 true chr3: 52287425-52290522 Medicago truncatula
Medtr3g111780 2.0kb downstream 2.0kb downstream 2000 false chr3: 52287425-52289424 Medicago truncatula
Medtr3g111780 5.0kb upstream 5.0kb upstream 6098 true chr3: 52289425-52295522 Medicago truncatula
Medtr3g111780 5.0kb upstream 5.0kb upstream 5000 false chr3: 52290523-52295522 Medicago truncatula
Medtr3g111780 5.0kb downstream 5.0kb downstream 6098 true chr3: 52284425-52290522 Medicago truncatula
Medtr3g111780 5.0kb downstream 5.0kb downstream 5000 false chr3: 52284425-52289424 Medicago truncatula
Medtr3g111780 10.0kb upstream 10.0kb upstream 11098 true chr3: 52289425-52300522 Medicago truncatula
Medtr3g111780 10.0kb upstream 10.0kb upstream 10000 false chr3: 52290523-52300522 Medicago truncatula
Medtr3g111780 10.0kb downstream 10.0kb downstream 11098 true chr3: 52279425-52290522 Medicago truncatula
Medtr3g111780 10.0kb downstream 10.0kb downstream 10000 false chr3: 52279425-52289424 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312769 5265 Fabidae View MSA
124072000 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low Low
cufflinks 0.045     Low  
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.152       High
cufflinks 0.025     Low  
cufflinks 0.094     Low  

0 Strain