Gene : Medtr3g111830 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12064//PTHR12064:SF35 - ANCIENT CONSERVED DOMAIN PROTEIN-RELATED Description:  CBS domain protein
Genomic Order:  6329 Name:  ? Medtr3g111830
Secondary Identifier:  ? PAC:31057923
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g111830 0.5kb upstream 0.5kb upstream 5645 true chr3: 52319771-52325415 Medicago truncatula
Medtr3g111830 0.5kb upstream 0.5kb upstream 500 false chr3: 52324916-52325415 Medicago truncatula
Medtr3g111830 0.5kb downstream 0.5kb downstream 5645 true chr3: 52319271-52324915 Medicago truncatula
Medtr3g111830 0.5kb downstream 0.5kb downstream 500 false chr3: 52319271-52319770 Medicago truncatula
Medtr3g111830 1.0kb upstream 1.0kb upstream 6145 true chr3: 52319771-52325915 Medicago truncatula
Medtr3g111830 1.0kb upstream 1.0kb upstream 1000 false chr3: 52324916-52325915 Medicago truncatula
Medtr3g111830 1.0kb downstream 1.0kb downstream 6145 true chr3: 52318771-52324915 Medicago truncatula
Medtr3g111830 1.0kb downstream 1.0kb downstream 1000 false chr3: 52318771-52319770 Medicago truncatula
Medtr3g111830 2.0kb upstream 2.0kb upstream 7145 true chr3: 52319771-52326915 Medicago truncatula
Medtr3g111830 2.0kb upstream 2.0kb upstream 2000 false chr3: 52324916-52326915 Medicago truncatula
Medtr3g111830 2.0kb downstream 2.0kb downstream 7145 true chr3: 52317771-52324915 Medicago truncatula
Medtr3g111830 2.0kb downstream 2.0kb downstream 2000 false chr3: 52317771-52319770 Medicago truncatula
Medtr3g111830 5.0kb upstream 5.0kb upstream 10145 true chr3: 52319771-52329915 Medicago truncatula
Medtr3g111830 5.0kb upstream 5.0kb upstream 5000 false chr3: 52324916-52329915 Medicago truncatula
Medtr3g111830 5.0kb downstream 5.0kb downstream 10145 true chr3: 52314771-52324915 Medicago truncatula
Medtr3g111830 5.0kb downstream 5.0kb downstream 5000 false chr3: 52314771-52319770 Medicago truncatula
Medtr3g111830 10.0kb upstream 10.0kb upstream 15145 true chr3: 52319771-52334915 Medicago truncatula
Medtr3g111830 10.0kb upstream 10.0kb upstream 10000 false chr3: 52324916-52334915 Medicago truncatula
Medtr3g111830 10.0kb downstream 10.0kb downstream 15145 true chr3: 52309771-52324915 Medicago truncatula
Medtr3g111830 10.0kb downstream 10.0kb downstream 10000 false chr3: 52309771-52319770 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308235 5265 Fabidae View MSA
124067520 5270 Rosid View MSA
123745826 5271 Pentapetalae View MSA
122787800 5272 Eudicot View MSA
122046250 5273 Angiosperm View MSA
121348237 5274 Embryophyte View MSA
123426941 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.613        
cufflinks 6.285        
cufflinks 8.394        
cufflinks 2.798       Low
cufflinks 7.583        
cufflinks 1.902       Low
cufflinks 6.255        
cufflinks 6.166        
cufflinks 4.633        

0 Strain