Gene : Medtr3g111670 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13286 - SAP30 Description:  histone deacetylase complex subunit SAP30 Sin3-binding protein
Genomic Order:  6318 Name:  ? Medtr3g111670
Secondary Identifier:  ? PAC:31056868
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g111670 0.5kb upstream 0.5kb upstream 4490 true chr3: 52217445-52221934 Medicago truncatula
Medtr3g111670 0.5kb upstream 0.5kb upstream 500 false chr3: 52221435-52221934 Medicago truncatula
Medtr3g111670 0.5kb downstream 0.5kb downstream 4490 true chr3: 52216945-52221434 Medicago truncatula
Medtr3g111670 0.5kb downstream 0.5kb downstream 500 false chr3: 52216945-52217444 Medicago truncatula
Medtr3g111670 1.0kb upstream 1.0kb upstream 4990 true chr3: 52217445-52222434 Medicago truncatula
Medtr3g111670 1.0kb upstream 1.0kb upstream 1000 false chr3: 52221435-52222434 Medicago truncatula
Medtr3g111670 1.0kb downstream 1.0kb downstream 4990 true chr3: 52216445-52221434 Medicago truncatula
Medtr3g111670 1.0kb downstream 1.0kb downstream 1000 false chr3: 52216445-52217444 Medicago truncatula
Medtr3g111670 2.0kb upstream 2.0kb upstream 5990 true chr3: 52217445-52223434 Medicago truncatula
Medtr3g111670 2.0kb upstream 2.0kb upstream 2000 false chr3: 52221435-52223434 Medicago truncatula
Medtr3g111670 2.0kb downstream 2.0kb downstream 5990 true chr3: 52215445-52221434 Medicago truncatula
Medtr3g111670 2.0kb downstream 2.0kb downstream 2000 false chr3: 52215445-52217444 Medicago truncatula
Medtr3g111670 5.0kb upstream 5.0kb upstream 8990 true chr3: 52217445-52226434 Medicago truncatula
Medtr3g111670 5.0kb upstream 5.0kb upstream 5000 false chr3: 52221435-52226434 Medicago truncatula
Medtr3g111670 5.0kb downstream 5.0kb downstream 8990 true chr3: 52212445-52221434 Medicago truncatula
Medtr3g111670 5.0kb downstream 5.0kb downstream 5000 false chr3: 52212445-52217444 Medicago truncatula
Medtr3g111670 10.0kb upstream 10.0kb upstream 13990 true chr3: 52217445-52231434 Medicago truncatula
Medtr3g111670 10.0kb upstream 10.0kb upstream 10000 false chr3: 52221435-52231434 Medicago truncatula
Medtr3g111670 10.0kb downstream 10.0kb downstream 13990 true chr3: 52207445-52221434 Medicago truncatula
Medtr3g111670 10.0kb downstream 10.0kb downstream 10000 false chr3: 52207445-52217444 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300805 5265 Fabidae View MSA
124061386 5270 Rosid View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.278       High
cufflinks 0.509        
cufflinks 0.499        
cufflinks 0.679        
cufflinks 0.63        
cufflinks 0.031     Low Low
cufflinks 1.167        
cufflinks 0.395        
cufflinks 0.929        

0 Strain