Gene : Medtr3g103610 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31490:SF1 - F19C14.2 PROTEIN-RELATED Description:  endo-1,4-beta-xylanase A-like protein
Genomic Order:  5709 Name:  ? Medtr3g103610
Secondary Identifier:  ? PAC:31059471
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g103610 0.5kb upstream 0.5kb upstream 4634 true chr3: 47884699-47889332 Medicago truncatula
Medtr3g103610 0.5kb upstream 0.5kb upstream 500 false chr3: 47888833-47889332 Medicago truncatula
Medtr3g103610 0.5kb downstream 0.5kb downstream 4634 true chr3: 47884199-47888832 Medicago truncatula
Medtr3g103610 0.5kb downstream 0.5kb downstream 500 false chr3: 47884199-47884698 Medicago truncatula
Medtr3g103610 1.0kb upstream 1.0kb upstream 5134 true chr3: 47884699-47889832 Medicago truncatula
Medtr3g103610 1.0kb upstream 1.0kb upstream 1000 false chr3: 47888833-47889832 Medicago truncatula
Medtr3g103610 1.0kb downstream 1.0kb downstream 5134 true chr3: 47883699-47888832 Medicago truncatula
Medtr3g103610 1.0kb downstream 1.0kb downstream 1000 false chr3: 47883699-47884698 Medicago truncatula
Medtr3g103610 2.0kb upstream 2.0kb upstream 6134 true chr3: 47884699-47890832 Medicago truncatula
Medtr3g103610 2.0kb upstream 2.0kb upstream 2000 false chr3: 47888833-47890832 Medicago truncatula
Medtr3g103610 2.0kb downstream 2.0kb downstream 6134 true chr3: 47882699-47888832 Medicago truncatula
Medtr3g103610 2.0kb downstream 2.0kb downstream 2000 false chr3: 47882699-47884698 Medicago truncatula
Medtr3g103610 5.0kb upstream 5.0kb upstream 9134 true chr3: 47884699-47893832 Medicago truncatula
Medtr3g103610 5.0kb upstream 5.0kb upstream 5000 false chr3: 47888833-47893832 Medicago truncatula
Medtr3g103610 5.0kb downstream 5.0kb downstream 9134 true chr3: 47879699-47888832 Medicago truncatula
Medtr3g103610 5.0kb downstream 5.0kb downstream 5000 false chr3: 47879699-47884698 Medicago truncatula
Medtr3g103610 10.0kb upstream 10.0kb upstream 14134 true chr3: 47884699-47898832 Medicago truncatula
Medtr3g103610 10.0kb upstream 10.0kb upstream 10000 false chr3: 47888833-47898832 Medicago truncatula
Medtr3g103610 10.0kb downstream 10.0kb downstream 14134 true chr3: 47874699-47888832 Medicago truncatula
Medtr3g103610 10.0kb downstream 10.0kb downstream 10000 false chr3: 47874699-47884698 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297174 5265 Fabidae View MSA
124066828 5270 Rosid View MSA
123742236 5271 Pentapetalae View MSA
122786340 5272 Eudicot View MSA
122047511 5273 Angiosperm View MSA
121347321 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.245       Low
cufflinks 2.144        
cufflinks 1.572        
cufflinks 1.246        
cufflinks 1.726        
cufflinks 0.749        
cufflinks 2.366        
cufflinks 2.084        
cufflinks 3.282       High

0 Strain