Gene : Medtr3g103460 M. truncatula Mt4.0v1
Defline:  (1 of 209) PF00847 - AP2 domain (AP2) Description:  AP2-like ethylene-responsive transcription factor
Genomic Order:  5696 Name:  ? Medtr3g103460
Secondary Identifier:  ? PAC:31061358
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g103460 0.5kb upstream 0.5kb upstream 4717 true chr3: 47750602-47755318 Medicago truncatula
Medtr3g103460 0.5kb upstream 0.5kb upstream 500 false chr3: 47750602-47751101 Medicago truncatula
Medtr3g103460 0.5kb downstream 0.5kb downstream 4717 true chr3: 47751102-47755818 Medicago truncatula
Medtr3g103460 0.5kb downstream 0.5kb downstream 500 false chr3: 47755319-47755818 Medicago truncatula
Medtr3g103460 1.0kb upstream 1.0kb upstream 5217 true chr3: 47750102-47755318 Medicago truncatula
Medtr3g103460 1.0kb upstream 1.0kb upstream 1000 false chr3: 47750102-47751101 Medicago truncatula
Medtr3g103460 1.0kb downstream 1.0kb downstream 5217 true chr3: 47751102-47756318 Medicago truncatula
Medtr3g103460 1.0kb downstream 1.0kb downstream 1000 false chr3: 47755319-47756318 Medicago truncatula
Medtr3g103460 2.0kb upstream 2.0kb upstream 6217 true chr3: 47749102-47755318 Medicago truncatula
Medtr3g103460 2.0kb upstream 2.0kb upstream 2000 false chr3: 47749102-47751101 Medicago truncatula
Medtr3g103460 2.0kb downstream 2.0kb downstream 6217 true chr3: 47751102-47757318 Medicago truncatula
Medtr3g103460 2.0kb downstream 2.0kb downstream 2000 false chr3: 47755319-47757318 Medicago truncatula
Medtr3g103460 5.0kb upstream 5.0kb upstream 9217 true chr3: 47746102-47755318 Medicago truncatula
Medtr3g103460 5.0kb upstream 5.0kb upstream 5000 false chr3: 47746102-47751101 Medicago truncatula
Medtr3g103460 5.0kb downstream 5.0kb downstream 9217 true chr3: 47751102-47760318 Medicago truncatula
Medtr3g103460 5.0kb downstream 5.0kb downstream 5000 false chr3: 47755319-47760318 Medicago truncatula
Medtr3g103460 10.0kb upstream 10.0kb upstream 14217 true chr3: 47741102-47755318 Medicago truncatula
Medtr3g103460 10.0kb upstream 10.0kb upstream 10000 false chr3: 47741102-47751101 Medicago truncatula
Medtr3g103460 10.0kb downstream 10.0kb downstream 14217 true chr3: 47751102-47765318 Medicago truncatula
Medtr3g103460 10.0kb downstream 10.0kb downstream 10000 false chr3: 47755319-47765318 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300220 5265 Fabidae View MSA
124069509 5270 Rosid View MSA
123749531 5271 Pentapetalae View MSA
122794764 5272 Eudicot View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.462       High
cufflinks 0.045     Low  
cufflinks 0.05     Low  
cufflinks 0.073        
cufflinks 0.065     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.145        
cufflinks 0.028     Low Low
cufflinks 0.282       High

0 Strain