Gene : Medtr3g104990 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31618:SF3 - MECHANOSENSITIVE ION CHANNEL PROTEIN 10-RELATED Description:  mechanosensitive ion channel family protein
Genomic Order:  5789 Name:  ? Medtr3g104990
Secondary Identifier:  ? PAC:31056042
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g104990 0.5kb upstream 0.5kb upstream 4197 true chr3: 48395977-48400173 Medicago truncatula
Medtr3g104990 0.5kb upstream 0.5kb upstream 500 false chr3: 48399674-48400173 Medicago truncatula
Medtr3g104990 0.5kb downstream 0.5kb downstream 4197 true chr3: 48395477-48399673 Medicago truncatula
Medtr3g104990 0.5kb downstream 0.5kb downstream 500 false chr3: 48395477-48395976 Medicago truncatula
Medtr3g104990 1.0kb upstream 1.0kb upstream 4697 true chr3: 48395977-48400673 Medicago truncatula
Medtr3g104990 1.0kb upstream 1.0kb upstream 1000 false chr3: 48399674-48400673 Medicago truncatula
Medtr3g104990 1.0kb downstream 1.0kb downstream 4697 true chr3: 48394977-48399673 Medicago truncatula
Medtr3g104990 1.0kb downstream 1.0kb downstream 1000 false chr3: 48394977-48395976 Medicago truncatula
Medtr3g104990 2.0kb upstream 2.0kb upstream 5697 true chr3: 48395977-48401673 Medicago truncatula
Medtr3g104990 2.0kb upstream 2.0kb upstream 2000 false chr3: 48399674-48401673 Medicago truncatula
Medtr3g104990 2.0kb downstream 2.0kb downstream 5697 true chr3: 48393977-48399673 Medicago truncatula
Medtr3g104990 2.0kb downstream 2.0kb downstream 2000 false chr3: 48393977-48395976 Medicago truncatula
Medtr3g104990 5.0kb upstream 5.0kb upstream 8697 true chr3: 48395977-48404673 Medicago truncatula
Medtr3g104990 5.0kb upstream 5.0kb upstream 5000 false chr3: 48399674-48404673 Medicago truncatula
Medtr3g104990 5.0kb downstream 5.0kb downstream 8697 true chr3: 48390977-48399673 Medicago truncatula
Medtr3g104990 5.0kb downstream 5.0kb downstream 5000 false chr3: 48390977-48395976 Medicago truncatula
Medtr3g104990 10.0kb upstream 10.0kb upstream 13697 true chr3: 48395977-48409673 Medicago truncatula
Medtr3g104990 10.0kb upstream 10.0kb upstream 10000 false chr3: 48399674-48409673 Medicago truncatula
Medtr3g104990 10.0kb downstream 10.0kb downstream 13697 true chr3: 48385977-48399673 Medicago truncatula
Medtr3g104990 10.0kb downstream 10.0kb downstream 10000 false chr3: 48385977-48395976 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122300872 5265 Fabidae View MSA
124069655 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.119        
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low  
cufflinks 0.003     Low Low
cufflinks 0.017     Low  
cufflinks 0.096        
cufflinks 0.003     Low Low
cufflinks 0.148       High

0 Strain