Gene : Medtr3g104700 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR24356:SF206 - AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN Description:  AGC kinase
Genomic Order:  5766 Name:  ? Medtr3g104700
Secondary Identifier:  ? PAC:31053824
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g104700 0.5kb upstream 0.5kb upstream 9119 true chr3: 48255627-48264745 Medicago truncatula
Medtr3g104700 0.5kb upstream 0.5kb upstream 500 false chr3: 48255627-48256126 Medicago truncatula
Medtr3g104700 0.5kb downstream 0.5kb downstream 9119 true chr3: 48256127-48265245 Medicago truncatula
Medtr3g104700 0.5kb downstream 0.5kb downstream 500 false chr3: 48264746-48265245 Medicago truncatula
Medtr3g104700 1.0kb upstream 1.0kb upstream 9619 true chr3: 48255127-48264745 Medicago truncatula
Medtr3g104700 1.0kb upstream 1.0kb upstream 1000 false chr3: 48255127-48256126 Medicago truncatula
Medtr3g104700 1.0kb downstream 1.0kb downstream 9619 true chr3: 48256127-48265745 Medicago truncatula
Medtr3g104700 1.0kb downstream 1.0kb downstream 1000 false chr3: 48264746-48265745 Medicago truncatula
Medtr3g104700 2.0kb upstream 2.0kb upstream 10619 true chr3: 48254127-48264745 Medicago truncatula
Medtr3g104700 2.0kb upstream 2.0kb upstream 2000 false chr3: 48254127-48256126 Medicago truncatula
Medtr3g104700 2.0kb downstream 2.0kb downstream 10619 true chr3: 48256127-48266745 Medicago truncatula
Medtr3g104700 2.0kb downstream 2.0kb downstream 2000 false chr3: 48264746-48266745 Medicago truncatula
Medtr3g104700 5.0kb upstream 5.0kb upstream 13619 true chr3: 48251127-48264745 Medicago truncatula
Medtr3g104700 5.0kb upstream 5.0kb upstream 5000 false chr3: 48251127-48256126 Medicago truncatula
Medtr3g104700 5.0kb downstream 5.0kb downstream 13619 true chr3: 48256127-48269745 Medicago truncatula
Medtr3g104700 5.0kb downstream 5.0kb downstream 5000 false chr3: 48264746-48269745 Medicago truncatula
Medtr3g104700 10.0kb upstream 10.0kb upstream 18619 true chr3: 48246127-48264745 Medicago truncatula
Medtr3g104700 10.0kb upstream 10.0kb upstream 10000 false chr3: 48246127-48256126 Medicago truncatula
Medtr3g104700 10.0kb downstream 10.0kb downstream 18619 true chr3: 48256127-48274745 Medicago truncatula
Medtr3g104700 10.0kb downstream 10.0kb downstream 10000 false chr3: 48264746-48274745 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041161 5273 Angiosperm View MSA
122301700 5265 Fabidae View MSA
124060430 5270 Rosid View MSA
123736636 5271 Pentapetalae View MSA
122791163 5272 Eudicot View MSA
121348610 5274 Embryophyte View MSA
123428649 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.347        
cufflinks 2.596        
cufflinks 3.935       High
cufflinks 1.302        
cufflinks 3.309        
cufflinks 0.524       Low
cufflinks 2.081        
cufflinks 3.011        
cufflinks 2.001        

0 Strain