Gene : Medtr3g104570 M. truncatula Mt4.0v1
Defline:  (1 of 54) PF00612 - IQ calmodulin-binding motif (IQ) Description:  IQ calmodulin-binding motif protein
Genomic Order:  5755 Name:  ? Medtr3g104570
Secondary Identifier:  ? PAC:31058138
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g104570 0.5kb upstream 0.5kb upstream 2639 true chr3: 48185077-48187715 Medicago truncatula
Medtr3g104570 0.5kb upstream 0.5kb upstream 500 false chr3: 48187216-48187715 Medicago truncatula
Medtr3g104570 0.5kb downstream 0.5kb downstream 2639 true chr3: 48184577-48187215 Medicago truncatula
Medtr3g104570 0.5kb downstream 0.5kb downstream 500 false chr3: 48184577-48185076 Medicago truncatula
Medtr3g104570 1.0kb upstream 1.0kb upstream 3139 true chr3: 48185077-48188215 Medicago truncatula
Medtr3g104570 1.0kb upstream 1.0kb upstream 1000 false chr3: 48187216-48188215 Medicago truncatula
Medtr3g104570 1.0kb downstream 1.0kb downstream 3139 true chr3: 48184077-48187215 Medicago truncatula
Medtr3g104570 1.0kb downstream 1.0kb downstream 1000 false chr3: 48184077-48185076 Medicago truncatula
Medtr3g104570 2.0kb upstream 2.0kb upstream 4139 true chr3: 48185077-48189215 Medicago truncatula
Medtr3g104570 2.0kb upstream 2.0kb upstream 2000 false chr3: 48187216-48189215 Medicago truncatula
Medtr3g104570 2.0kb downstream 2.0kb downstream 4139 true chr3: 48183077-48187215 Medicago truncatula
Medtr3g104570 2.0kb downstream 2.0kb downstream 2000 false chr3: 48183077-48185076 Medicago truncatula
Medtr3g104570 5.0kb upstream 5.0kb upstream 7139 true chr3: 48185077-48192215 Medicago truncatula
Medtr3g104570 5.0kb upstream 5.0kb upstream 5000 false chr3: 48187216-48192215 Medicago truncatula
Medtr3g104570 5.0kb downstream 5.0kb downstream 7139 true chr3: 48180077-48187215 Medicago truncatula
Medtr3g104570 5.0kb downstream 5.0kb downstream 5000 false chr3: 48180077-48185076 Medicago truncatula
Medtr3g104570 10.0kb upstream 10.0kb upstream 12139 true chr3: 48185077-48197215 Medicago truncatula
Medtr3g104570 10.0kb upstream 10.0kb upstream 10000 false chr3: 48187216-48197215 Medicago truncatula
Medtr3g104570 10.0kb downstream 10.0kb downstream 12139 true chr3: 48175077-48187215 Medicago truncatula
Medtr3g104570 10.0kb downstream 10.0kb downstream 10000 false chr3: 48175077-48185076 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041133 5273 Angiosperm View MSA
122306621 5265 Fabidae View MSA
124066081 5270 Rosid View MSA
123748663 5271 Pentapetalae View MSA
122789364 5272 Eudicot View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.288        
cufflinks 0.376        
cufflinks 0.371        
cufflinks 2.253       High
cufflinks 0.393        
cufflinks 0.515        
cufflinks 3.585       High
cufflinks 0.333        
cufflinks 2.847       High

0 Strain