Gene : Medtr3g105440 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10366//PTHR10366:SF471 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Description:  3beta-hydroxysteroid-dehydrogenase/decarboxylase
Genomic Order:  5818 Name:  ? Medtr3g105440
Secondary Identifier:  ? PAC:31053292
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g105440 0.5kb upstream 0.5kb upstream 6824 true chr3: 48619239-48626062 Medicago truncatula
Medtr3g105440 0.5kb upstream 0.5kb upstream 500 false chr3: 48625563-48626062 Medicago truncatula
Medtr3g105440 0.5kb downstream 0.5kb downstream 6824 true chr3: 48618739-48625562 Medicago truncatula
Medtr3g105440 0.5kb downstream 0.5kb downstream 500 false chr3: 48618739-48619238 Medicago truncatula
Medtr3g105440 1.0kb upstream 1.0kb upstream 7324 true chr3: 48619239-48626562 Medicago truncatula
Medtr3g105440 1.0kb upstream 1.0kb upstream 1000 false chr3: 48625563-48626562 Medicago truncatula
Medtr3g105440 1.0kb downstream 1.0kb downstream 7324 true chr3: 48618239-48625562 Medicago truncatula
Medtr3g105440 1.0kb downstream 1.0kb downstream 1000 false chr3: 48618239-48619238 Medicago truncatula
Medtr3g105440 2.0kb upstream 2.0kb upstream 8324 true chr3: 48619239-48627562 Medicago truncatula
Medtr3g105440 2.0kb upstream 2.0kb upstream 2000 false chr3: 48625563-48627562 Medicago truncatula
Medtr3g105440 2.0kb downstream 2.0kb downstream 8324 true chr3: 48617239-48625562 Medicago truncatula
Medtr3g105440 2.0kb downstream 2.0kb downstream 2000 false chr3: 48617239-48619238 Medicago truncatula
Medtr3g105440 5.0kb upstream 5.0kb upstream 11324 true chr3: 48619239-48630562 Medicago truncatula
Medtr3g105440 5.0kb upstream 5.0kb upstream 5000 false chr3: 48625563-48630562 Medicago truncatula
Medtr3g105440 5.0kb downstream 5.0kb downstream 11324 true chr3: 48614239-48625562 Medicago truncatula
Medtr3g105440 5.0kb downstream 5.0kb downstream 5000 false chr3: 48614239-48619238 Medicago truncatula
Medtr3g105440 10.0kb upstream 10.0kb upstream 16324 true chr3: 48619239-48635562 Medicago truncatula
Medtr3g105440 10.0kb upstream 10.0kb upstream 10000 false chr3: 48625563-48635562 Medicago truncatula
Medtr3g105440 10.0kb downstream 10.0kb downstream 16324 true chr3: 48609239-48625562 Medicago truncatula
Medtr3g105440 10.0kb downstream 10.0kb downstream 10000 false chr3: 48609239-48619238 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306528 5265 Fabidae View MSA
124064993 5270 Rosid View MSA
123743534 5271 Pentapetalae View MSA
122791319 5272 Eudicot View MSA
122044485 5273 Angiosperm View MSA
121347416 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.29        
cufflinks 1.899        
cufflinks 2.157        
cufflinks 0.989        
cufflinks 2.366       High
cufflinks 0.608       Low
cufflinks 1.263        
cufflinks 2.086        
cufflinks 1.445        

0 Strain