Gene : Medtr3g105080 M. truncatula Mt4.0v1
Description:  ferredoxin-like protein Genomic Order:  5796
Name:  ? Medtr3g105080 Secondary Identifier:  ? PAC:31060813
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g105080 0.5kb upstream 0.5kb upstream 3453 true chr3: 48449100-48452552 Medicago truncatula
Medtr3g105080 0.5kb upstream 0.5kb upstream 500 false chr3: 48449100-48449599 Medicago truncatula
Medtr3g105080 0.5kb downstream 0.5kb downstream 3453 true chr3: 48449600-48453052 Medicago truncatula
Medtr3g105080 0.5kb downstream 0.5kb downstream 500 false chr3: 48452553-48453052 Medicago truncatula
Medtr3g105080 1.0kb upstream 1.0kb upstream 3953 true chr3: 48448600-48452552 Medicago truncatula
Medtr3g105080 1.0kb upstream 1.0kb upstream 1000 false chr3: 48448600-48449599 Medicago truncatula
Medtr3g105080 1.0kb downstream 1.0kb downstream 3953 true chr3: 48449600-48453552 Medicago truncatula
Medtr3g105080 1.0kb downstream 1.0kb downstream 1000 false chr3: 48452553-48453552 Medicago truncatula
Medtr3g105080 2.0kb upstream 2.0kb upstream 4953 true chr3: 48447600-48452552 Medicago truncatula
Medtr3g105080 2.0kb upstream 2.0kb upstream 2000 false chr3: 48447600-48449599 Medicago truncatula
Medtr3g105080 2.0kb downstream 2.0kb downstream 4953 true chr3: 48449600-48454552 Medicago truncatula
Medtr3g105080 2.0kb downstream 2.0kb downstream 2000 false chr3: 48452553-48454552 Medicago truncatula
Medtr3g105080 5.0kb upstream 5.0kb upstream 7953 true chr3: 48444600-48452552 Medicago truncatula
Medtr3g105080 5.0kb upstream 5.0kb upstream 5000 false chr3: 48444600-48449599 Medicago truncatula
Medtr3g105080 5.0kb downstream 5.0kb downstream 7953 true chr3: 48449600-48457552 Medicago truncatula
Medtr3g105080 5.0kb downstream 5.0kb downstream 5000 false chr3: 48452553-48457552 Medicago truncatula
Medtr3g105080 10.0kb upstream 10.0kb upstream 12953 true chr3: 48439600-48452552 Medicago truncatula
Medtr3g105080 10.0kb upstream 10.0kb upstream 10000 false chr3: 48439600-48449599 Medicago truncatula
Medtr3g105080 10.0kb downstream 10.0kb downstream 12953 true chr3: 48449600-48462552 Medicago truncatula
Medtr3g105080 10.0kb downstream 10.0kb downstream 10000 false chr3: 48452553-48462552 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305398 5265 Fabidae View MSA
124070213 5270 Rosid View MSA
123746811 5271 Pentapetalae View MSA
122794670 5272 Eudicot View MSA
122048192 5273 Angiosperm View MSA
121310879 5274 Embryophyte View MSA
123348261 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.136       Low
cufflinks 1.675        
cufflinks 0.842        
cufflinks 6.489       High
cufflinks 2.834        
cufflinks 3.718        
cufflinks 2.68        
cufflinks 1.004        
cufflinks 7.974       High

0 Strain