Gene : Medtr3g106160 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11638:SF86 - CHAPERONE PROTEIN CLPB4, MITOCHONDRIAL Description:  chaperone ClpB, putative
Genomic Order:  5871 Name:  ? Medtr3g106160
Secondary Identifier:  ? PAC:31059335
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g106160 0.5kb upstream 0.5kb upstream 8975 true chr3: 49006958-49015932 Medicago truncatula
Medtr3g106160 0.5kb upstream 0.5kb upstream 500 false chr3: 49015433-49015932 Medicago truncatula
Medtr3g106160 0.5kb downstream 0.5kb downstream 8975 true chr3: 49006458-49015432 Medicago truncatula
Medtr3g106160 0.5kb downstream 0.5kb downstream 500 false chr3: 49006458-49006957 Medicago truncatula
Medtr3g106160 1.0kb upstream 1.0kb upstream 9475 true chr3: 49006958-49016432 Medicago truncatula
Medtr3g106160 1.0kb upstream 1.0kb upstream 1000 false chr3: 49015433-49016432 Medicago truncatula
Medtr3g106160 1.0kb downstream 1.0kb downstream 9475 true chr3: 49005958-49015432 Medicago truncatula
Medtr3g106160 1.0kb downstream 1.0kb downstream 1000 false chr3: 49005958-49006957 Medicago truncatula
Medtr3g106160 2.0kb upstream 2.0kb upstream 10475 true chr3: 49006958-49017432 Medicago truncatula
Medtr3g106160 2.0kb upstream 2.0kb upstream 2000 false chr3: 49015433-49017432 Medicago truncatula
Medtr3g106160 2.0kb downstream 2.0kb downstream 10475 true chr3: 49004958-49015432 Medicago truncatula
Medtr3g106160 2.0kb downstream 2.0kb downstream 2000 false chr3: 49004958-49006957 Medicago truncatula
Medtr3g106160 5.0kb upstream 5.0kb upstream 13475 true chr3: 49006958-49020432 Medicago truncatula
Medtr3g106160 5.0kb upstream 5.0kb upstream 5000 false chr3: 49015433-49020432 Medicago truncatula
Medtr3g106160 5.0kb downstream 5.0kb downstream 13475 true chr3: 49001958-49015432 Medicago truncatula
Medtr3g106160 5.0kb downstream 5.0kb downstream 5000 false chr3: 49001958-49006957 Medicago truncatula
Medtr3g106160 10.0kb upstream 10.0kb upstream 18475 true chr3: 49006958-49025432 Medicago truncatula
Medtr3g106160 10.0kb upstream 10.0kb upstream 10000 false chr3: 49015433-49025432 Medicago truncatula
Medtr3g106160 10.0kb downstream 10.0kb downstream 18475 true chr3: 48996958-49015432 Medicago truncatula
Medtr3g106160 10.0kb downstream 10.0kb downstream 10000 false chr3: 48996958-49006957 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300993 5265 Fabidae View MSA
124064448 5270 Rosid View MSA
123739066 5271 Pentapetalae View MSA
122786237 5272 Eudicot View MSA
122042746 5273 Angiosperm View MSA
121310015 5274 Embryophyte View MSA
123426722 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.692       High
cufflinks 2.877        
cufflinks 2.137        
cufflinks 0.576       Low
cufflinks 4.13        
cufflinks 2.017        
cufflinks 2.863        
cufflinks 2.102        
cufflinks 2.757        

0 Strain