Gene : Medtr3g105780 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12136//PTHR12136:SF38 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Description:  lipid-binding protein
Genomic Order:  5843 Name:  ? Medtr3g105780
Secondary Identifier:  ? PAC:31058101
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g105780 0.5kb upstream 0.5kb upstream 1665 true chr3: 48796218-48797882 Medicago truncatula
Medtr3g105780 0.5kb upstream 0.5kb upstream 500 false chr3: 48796218-48796717 Medicago truncatula
Medtr3g105780 0.5kb downstream 0.5kb downstream 1665 true chr3: 48796718-48798382 Medicago truncatula
Medtr3g105780 0.5kb downstream 0.5kb downstream 500 false chr3: 48797883-48798382 Medicago truncatula
Medtr3g105780 1.0kb upstream 1.0kb upstream 2165 true chr3: 48795718-48797882 Medicago truncatula
Medtr3g105780 1.0kb upstream 1.0kb upstream 1000 false chr3: 48795718-48796717 Medicago truncatula
Medtr3g105780 1.0kb downstream 1.0kb downstream 2165 true chr3: 48796718-48798882 Medicago truncatula
Medtr3g105780 1.0kb downstream 1.0kb downstream 1000 false chr3: 48797883-48798882 Medicago truncatula
Medtr3g105780 2.0kb upstream 2.0kb upstream 3165 true chr3: 48794718-48797882 Medicago truncatula
Medtr3g105780 2.0kb upstream 2.0kb upstream 2000 false chr3: 48794718-48796717 Medicago truncatula
Medtr3g105780 2.0kb downstream 2.0kb downstream 3165 true chr3: 48796718-48799882 Medicago truncatula
Medtr3g105780 2.0kb downstream 2.0kb downstream 2000 false chr3: 48797883-48799882 Medicago truncatula
Medtr3g105780 5.0kb upstream 5.0kb upstream 6165 true chr3: 48791718-48797882 Medicago truncatula
Medtr3g105780 5.0kb upstream 5.0kb upstream 5000 false chr3: 48791718-48796717 Medicago truncatula
Medtr3g105780 5.0kb downstream 5.0kb downstream 6165 true chr3: 48796718-48802882 Medicago truncatula
Medtr3g105780 5.0kb downstream 5.0kb downstream 5000 false chr3: 48797883-48802882 Medicago truncatula
Medtr3g105780 10.0kb upstream 10.0kb upstream 11165 true chr3: 48786718-48797882 Medicago truncatula
Medtr3g105780 10.0kb upstream 10.0kb upstream 10000 false chr3: 48786718-48796717 Medicago truncatula
Medtr3g105780 10.0kb downstream 10.0kb downstream 11165 true chr3: 48796718-48807882 Medicago truncatula
Medtr3g105780 10.0kb downstream 10.0kb downstream 10000 false chr3: 48797883-48807882 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301077 5265 Fabidae View MSA
124064079 5270 Rosid View MSA
123745127 5271 Pentapetalae View MSA
122790328 5272 Eudicot View MSA
122048003 5273 Angiosperm View MSA
121346001 5274 Embryophyte View MSA
123380307 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.84     High Low
cufflinks 24.934     High  
cufflinks 24.0     High  
cufflinks 27.85     High  
cufflinks 20.618     High  
cufflinks 29.072     High  
cufflinks 16.806     High Low
cufflinks 19.583     High  
cufflinks 35.503     High High

0 Strain