Gene : Medtr3g105830 M. truncatula Mt4.0v1
Defline:  (1 of 21) 5.3.4.1 - Protein disulfide-isomerase / S-S rearrangase Description:  Tsi1-interacting protein TSIP1
Genomic Order:  5847 Name:  ? Medtr3g105830
Secondary Identifier:  ? PAC:31061354
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g105830 0.5kb upstream 0.5kb upstream 2577 true chr3: 48815451-48818027 Medicago truncatula
Medtr3g105830 0.5kb upstream 0.5kb upstream 500 false chr3: 48817528-48818027 Medicago truncatula
Medtr3g105830 0.5kb downstream 0.5kb downstream 2577 true chr3: 48814951-48817527 Medicago truncatula
Medtr3g105830 0.5kb downstream 0.5kb downstream 500 false chr3: 48814951-48815450 Medicago truncatula
Medtr3g105830 1.0kb upstream 1.0kb upstream 3077 true chr3: 48815451-48818527 Medicago truncatula
Medtr3g105830 1.0kb upstream 1.0kb upstream 1000 false chr3: 48817528-48818527 Medicago truncatula
Medtr3g105830 1.0kb downstream 1.0kb downstream 3077 true chr3: 48814451-48817527 Medicago truncatula
Medtr3g105830 1.0kb downstream 1.0kb downstream 1000 false chr3: 48814451-48815450 Medicago truncatula
Medtr3g105830 2.0kb upstream 2.0kb upstream 4077 true chr3: 48815451-48819527 Medicago truncatula
Medtr3g105830 2.0kb upstream 2.0kb upstream 2000 false chr3: 48817528-48819527 Medicago truncatula
Medtr3g105830 2.0kb downstream 2.0kb downstream 4077 true chr3: 48813451-48817527 Medicago truncatula
Medtr3g105830 2.0kb downstream 2.0kb downstream 2000 false chr3: 48813451-48815450 Medicago truncatula
Medtr3g105830 5.0kb upstream 5.0kb upstream 7077 true chr3: 48815451-48822527 Medicago truncatula
Medtr3g105830 5.0kb upstream 5.0kb upstream 5000 false chr3: 48817528-48822527 Medicago truncatula
Medtr3g105830 5.0kb downstream 5.0kb downstream 7077 true chr3: 48810451-48817527 Medicago truncatula
Medtr3g105830 5.0kb downstream 5.0kb downstream 5000 false chr3: 48810451-48815450 Medicago truncatula
Medtr3g105830 10.0kb upstream 10.0kb upstream 12077 true chr3: 48815451-48827527 Medicago truncatula
Medtr3g105830 10.0kb upstream 10.0kb upstream 10000 false chr3: 48817528-48827527 Medicago truncatula
Medtr3g105830 10.0kb downstream 10.0kb downstream 12077 true chr3: 48805451-48817527 Medicago truncatula
Medtr3g105830 10.0kb downstream 10.0kb downstream 10000 false chr3: 48805451-48815450 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311082 5265 Fabidae View MSA
124063702 5270 Rosid View MSA
123736816 5271 Pentapetalae View MSA
122790293 5272 Eudicot View MSA
122047663 5273 Angiosperm View MSA
121346624 5274 Embryophyte View MSA
123425591 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.867     High Low
cufflinks 16.158     High  
cufflinks 12.261     High  
cufflinks 19.381     High High
cufflinks 11.105     High Low
cufflinks 14.283     High  
cufflinks 20.077     High High
cufflinks 16.629     High  
cufflinks 12.809     High  

0 Strain