Gene : Medtr3g106570 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG3306 - Predicted membrane protein Description:  ER membrane protein complex subunit-like protein
Genomic Order:  5901 Name:  ? Medtr3g106570
Secondary Identifier:  ? PAC:31058714
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g106570 0.5kb upstream 0.5kb upstream 4271 true chr3: 49257161-49261431 Medicago truncatula
Medtr3g106570 0.5kb upstream 0.5kb upstream 500 false chr3: 49260932-49261431 Medicago truncatula
Medtr3g106570 0.5kb downstream 0.5kb downstream 4271 true chr3: 49256661-49260931 Medicago truncatula
Medtr3g106570 0.5kb downstream 0.5kb downstream 500 false chr3: 49256661-49257160 Medicago truncatula
Medtr3g106570 1.0kb upstream 1.0kb upstream 4771 true chr3: 49257161-49261931 Medicago truncatula
Medtr3g106570 1.0kb upstream 1.0kb upstream 1000 false chr3: 49260932-49261931 Medicago truncatula
Medtr3g106570 1.0kb downstream 1.0kb downstream 4771 true chr3: 49256161-49260931 Medicago truncatula
Medtr3g106570 1.0kb downstream 1.0kb downstream 1000 false chr3: 49256161-49257160 Medicago truncatula
Medtr3g106570 2.0kb upstream 2.0kb upstream 5771 true chr3: 49257161-49262931 Medicago truncatula
Medtr3g106570 2.0kb upstream 2.0kb upstream 2000 false chr3: 49260932-49262931 Medicago truncatula
Medtr3g106570 2.0kb downstream 2.0kb downstream 5771 true chr3: 49255161-49260931 Medicago truncatula
Medtr3g106570 2.0kb downstream 2.0kb downstream 2000 false chr3: 49255161-49257160 Medicago truncatula
Medtr3g106570 5.0kb upstream 5.0kb upstream 8771 true chr3: 49257161-49265931 Medicago truncatula
Medtr3g106570 5.0kb upstream 5.0kb upstream 5000 false chr3: 49260932-49265931 Medicago truncatula
Medtr3g106570 5.0kb downstream 5.0kb downstream 8771 true chr3: 49252161-49260931 Medicago truncatula
Medtr3g106570 5.0kb downstream 5.0kb downstream 5000 false chr3: 49252161-49257160 Medicago truncatula
Medtr3g106570 10.0kb upstream 10.0kb upstream 13771 true chr3: 49257161-49270931 Medicago truncatula
Medtr3g106570 10.0kb upstream 10.0kb upstream 10000 false chr3: 49260932-49270931 Medicago truncatula
Medtr3g106570 10.0kb downstream 10.0kb downstream 13771 true chr3: 49247161-49260931 Medicago truncatula
Medtr3g106570 10.0kb downstream 10.0kb downstream 10000 false chr3: 49247161-49257160 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304302 5265 Fabidae View MSA
124061047 5270 Rosid View MSA
123750181 5271 Pentapetalae View MSA
122793611 5272 Eudicot View MSA
122047015 5273 Angiosperm View MSA
121345754 5274 Embryophyte View MSA
123424414 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.146        
cufflinks 9.028        
cufflinks 10.323     High  
cufflinks 19.292     High High
cufflinks 9.925        
cufflinks 8.641        
cufflinks 10.088     High  
cufflinks 8.492        
cufflinks 10.325     High  

0 Strain