Gene : Medtr3g106410 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13109 - NEUROCHONDRIN Description:  neurochondrin protein
Genomic Order:  5888 Name:  ? Medtr3g106410
Secondary Identifier:  ? PAC:31058066
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g106410 0.5kb upstream 0.5kb upstream 9579 true chr3: 49176240-49185818 Medicago truncatula
Medtr3g106410 0.5kb upstream 0.5kb upstream 500 false chr3: 49176240-49176739 Medicago truncatula
Medtr3g106410 0.5kb downstream 0.5kb downstream 9579 true chr3: 49176740-49186318 Medicago truncatula
Medtr3g106410 0.5kb downstream 0.5kb downstream 500 false chr3: 49185819-49186318 Medicago truncatula
Medtr3g106410 1.0kb upstream 1.0kb upstream 10079 true chr3: 49175740-49185818 Medicago truncatula
Medtr3g106410 1.0kb upstream 1.0kb upstream 1000 false chr3: 49175740-49176739 Medicago truncatula
Medtr3g106410 1.0kb downstream 1.0kb downstream 10079 true chr3: 49176740-49186818 Medicago truncatula
Medtr3g106410 1.0kb downstream 1.0kb downstream 1000 false chr3: 49185819-49186818 Medicago truncatula
Medtr3g106410 2.0kb upstream 2.0kb upstream 11079 true chr3: 49174740-49185818 Medicago truncatula
Medtr3g106410 2.0kb upstream 2.0kb upstream 2000 false chr3: 49174740-49176739 Medicago truncatula
Medtr3g106410 2.0kb downstream 2.0kb downstream 11079 true chr3: 49176740-49187818 Medicago truncatula
Medtr3g106410 2.0kb downstream 2.0kb downstream 2000 false chr3: 49185819-49187818 Medicago truncatula
Medtr3g106410 5.0kb upstream 5.0kb upstream 14079 true chr3: 49171740-49185818 Medicago truncatula
Medtr3g106410 5.0kb upstream 5.0kb upstream 5000 false chr3: 49171740-49176739 Medicago truncatula
Medtr3g106410 5.0kb downstream 5.0kb downstream 14079 true chr3: 49176740-49190818 Medicago truncatula
Medtr3g106410 5.0kb downstream 5.0kb downstream 5000 false chr3: 49185819-49190818 Medicago truncatula
Medtr3g106410 10.0kb upstream 10.0kb upstream 19079 true chr3: 49166740-49185818 Medicago truncatula
Medtr3g106410 10.0kb upstream 10.0kb upstream 10000 false chr3: 49166740-49176739 Medicago truncatula
Medtr3g106410 10.0kb downstream 10.0kb downstream 19079 true chr3: 49176740-49195818 Medicago truncatula
Medtr3g106410 10.0kb downstream 10.0kb downstream 10000 false chr3: 49185819-49195818 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302613 5265 Fabidae View MSA
124063922 5270 Rosid View MSA
123739094 5271 Pentapetalae View MSA
122786343 5272 Eudicot View MSA
122047027 5273 Angiosperm View MSA
121345052 5274 Embryophyte View MSA
123426950 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.215       High
cufflinks 0.632        
cufflinks 0.645        
cufflinks 0.156       Low
cufflinks 1.241        
cufflinks 0.158       Low
cufflinks 0.394        
cufflinks 0.668        
cufflinks 0.553        

0 Strain