Gene : Medtr3g106420 M. truncatula Mt4.0v1
Defline:  (1 of 11) PTHR13806 - FLOTILLIN-RELATED Description:  SPFH/band 7/PHB domain membrane-associated family protein
Genomic Order:  5889 Name:  ? Medtr3g106420
Secondary Identifier:  ? PAC:31053455
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g106420 0.5kb upstream 0.5kb upstream 3382 true chr3: 49186284-49189665 Medicago truncatula
Medtr3g106420 0.5kb upstream 0.5kb upstream 500 false chr3: 49189166-49189665 Medicago truncatula
Medtr3g106420 0.5kb downstream 0.5kb downstream 3382 true chr3: 49185784-49189165 Medicago truncatula
Medtr3g106420 0.5kb downstream 0.5kb downstream 500 false chr3: 49185784-49186283 Medicago truncatula
Medtr3g106420 1.0kb upstream 1.0kb upstream 3882 true chr3: 49186284-49190165 Medicago truncatula
Medtr3g106420 1.0kb upstream 1.0kb upstream 1000 false chr3: 49189166-49190165 Medicago truncatula
Medtr3g106420 1.0kb downstream 1.0kb downstream 3882 true chr3: 49185284-49189165 Medicago truncatula
Medtr3g106420 1.0kb downstream 1.0kb downstream 1000 false chr3: 49185284-49186283 Medicago truncatula
Medtr3g106420 2.0kb upstream 2.0kb upstream 4882 true chr3: 49186284-49191165 Medicago truncatula
Medtr3g106420 2.0kb upstream 2.0kb upstream 2000 false chr3: 49189166-49191165 Medicago truncatula
Medtr3g106420 2.0kb downstream 2.0kb downstream 4882 true chr3: 49184284-49189165 Medicago truncatula
Medtr3g106420 2.0kb downstream 2.0kb downstream 2000 false chr3: 49184284-49186283 Medicago truncatula
Medtr3g106420 5.0kb upstream 5.0kb upstream 7882 true chr3: 49186284-49194165 Medicago truncatula
Medtr3g106420 5.0kb upstream 5.0kb upstream 5000 false chr3: 49189166-49194165 Medicago truncatula
Medtr3g106420 5.0kb downstream 5.0kb downstream 7882 true chr3: 49181284-49189165 Medicago truncatula
Medtr3g106420 5.0kb downstream 5.0kb downstream 5000 false chr3: 49181284-49186283 Medicago truncatula
Medtr3g106420 10.0kb upstream 10.0kb upstream 12882 true chr3: 49186284-49199165 Medicago truncatula
Medtr3g106420 10.0kb upstream 10.0kb upstream 10000 false chr3: 49189166-49199165 Medicago truncatula
Medtr3g106420 10.0kb downstream 10.0kb downstream 12882 true chr3: 49176284-49189165 Medicago truncatula
Medtr3g106420 10.0kb downstream 10.0kb downstream 10000 false chr3: 49176284-49186283 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304716 5265 Fabidae View MSA
124060945 5270 Rosid View MSA
123742002 5271 Pentapetalae View MSA
122786669 5272 Eudicot View MSA
122043922 5273 Angiosperm View MSA
121351294 5274 Embryophyte View MSA
123427919 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.738       High
cufflinks 0.105        
cufflinks 0.079        
cufflinks 0.097        
cufflinks 0.08        
cufflinks 0.106     Low  
cufflinks 0.092        
cufflinks 0.054     Low  
cufflinks 0.185        

0 Strain