Gene : Medtr3g106250 M. truncatula Mt4.0v1
Defline:  (1 of 17) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Description:  DUF868 family protein
Genomic Order:  5877 Name:  ? Medtr3g106250
Secondary Identifier:  ? PAC:31054661
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g106250 0.5kb upstream 0.5kb upstream 2307 true chr3: 49077745-49080051 Medicago truncatula
Medtr3g106250 0.5kb upstream 0.5kb upstream 500 false chr3: 49079552-49080051 Medicago truncatula
Medtr3g106250 0.5kb downstream 0.5kb downstream 2307 true chr3: 49077245-49079551 Medicago truncatula
Medtr3g106250 0.5kb downstream 0.5kb downstream 500 false chr3: 49077245-49077744 Medicago truncatula
Medtr3g106250 1.0kb upstream 1.0kb upstream 2807 true chr3: 49077745-49080551 Medicago truncatula
Medtr3g106250 1.0kb upstream 1.0kb upstream 1000 false chr3: 49079552-49080551 Medicago truncatula
Medtr3g106250 1.0kb downstream 1.0kb downstream 2807 true chr3: 49076745-49079551 Medicago truncatula
Medtr3g106250 1.0kb downstream 1.0kb downstream 1000 false chr3: 49076745-49077744 Medicago truncatula
Medtr3g106250 2.0kb upstream 2.0kb upstream 3807 true chr3: 49077745-49081551 Medicago truncatula
Medtr3g106250 2.0kb upstream 2.0kb upstream 2000 false chr3: 49079552-49081551 Medicago truncatula
Medtr3g106250 2.0kb downstream 2.0kb downstream 3807 true chr3: 49075745-49079551 Medicago truncatula
Medtr3g106250 2.0kb downstream 2.0kb downstream 2000 false chr3: 49075745-49077744 Medicago truncatula
Medtr3g106250 5.0kb upstream 5.0kb upstream 6807 true chr3: 49077745-49084551 Medicago truncatula
Medtr3g106250 5.0kb upstream 5.0kb upstream 5000 false chr3: 49079552-49084551 Medicago truncatula
Medtr3g106250 5.0kb downstream 5.0kb downstream 6807 true chr3: 49072745-49079551 Medicago truncatula
Medtr3g106250 5.0kb downstream 5.0kb downstream 5000 false chr3: 49072745-49077744 Medicago truncatula
Medtr3g106250 10.0kb upstream 10.0kb upstream 11807 true chr3: 49077745-49089551 Medicago truncatula
Medtr3g106250 10.0kb upstream 10.0kb upstream 10000 false chr3: 49079552-49089551 Medicago truncatula
Medtr3g106250 10.0kb downstream 10.0kb downstream 11807 true chr3: 49067745-49079551 Medicago truncatula
Medtr3g106250 10.0kb downstream 10.0kb downstream 10000 false chr3: 49067745-49077744 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040994 5273 Angiosperm View MSA
122302303 5265 Fabidae View MSA
124064472 5270 Rosid View MSA
123743333 5271 Pentapetalae View MSA
122793790 5272 Eudicot View MSA
121309781 5274 Embryophyte View MSA
123347442 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.882     High  
cufflinks 7.568        
cufflinks 6.517        
cufflinks 10.661     High  
cufflinks 9.803        
cufflinks 21.394     High  
cufflinks 33.491     High High
cufflinks 4.66       Low
cufflinks 31.819     High High

0 Strain