Gene : Medtr3g107360 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR18896:SF11 - PHOSPHOLIPASE D ALPHA 1-RELATED Description:  phospholipase D alpha 1
Genomic Order:  5940 Name:  ? Medtr3g107360
Secondary Identifier:  ? PAC:31058022
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPASYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3561 Medicago truncatula pathologic  
Mtruncatula PWY-7039 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g107360 0.5kb upstream 0.5kb upstream 3678 true chr3: 49519858-49523535 Medicago truncatula
Medtr3g107360 0.5kb upstream 0.5kb upstream 500 false chr3: 49523036-49523535 Medicago truncatula
Medtr3g107360 0.5kb downstream 0.5kb downstream 3678 true chr3: 49519358-49523035 Medicago truncatula
Medtr3g107360 0.5kb downstream 0.5kb downstream 500 false chr3: 49519358-49519857 Medicago truncatula
Medtr3g107360 1.0kb upstream 1.0kb upstream 4178 true chr3: 49519858-49524035 Medicago truncatula
Medtr3g107360 1.0kb upstream 1.0kb upstream 1000 false chr3: 49523036-49524035 Medicago truncatula
Medtr3g107360 1.0kb downstream 1.0kb downstream 4178 true chr3: 49518858-49523035 Medicago truncatula
Medtr3g107360 1.0kb downstream 1.0kb downstream 1000 false chr3: 49518858-49519857 Medicago truncatula
Medtr3g107360 2.0kb upstream 2.0kb upstream 5178 true chr3: 49519858-49525035 Medicago truncatula
Medtr3g107360 2.0kb upstream 2.0kb upstream 2000 false chr3: 49523036-49525035 Medicago truncatula
Medtr3g107360 2.0kb downstream 2.0kb downstream 5178 true chr3: 49517858-49523035 Medicago truncatula
Medtr3g107360 2.0kb downstream 2.0kb downstream 2000 false chr3: 49517858-49519857 Medicago truncatula
Medtr3g107360 5.0kb upstream 5.0kb upstream 8178 true chr3: 49519858-49528035 Medicago truncatula
Medtr3g107360 5.0kb upstream 5.0kb upstream 5000 false chr3: 49523036-49528035 Medicago truncatula
Medtr3g107360 5.0kb downstream 5.0kb downstream 8178 true chr3: 49514858-49523035 Medicago truncatula
Medtr3g107360 5.0kb downstream 5.0kb downstream 5000 false chr3: 49514858-49519857 Medicago truncatula
Medtr3g107360 10.0kb upstream 10.0kb upstream 13178 true chr3: 49519858-49533035 Medicago truncatula
Medtr3g107360 10.0kb upstream 10.0kb upstream 10000 false chr3: 49523036-49533035 Medicago truncatula
Medtr3g107360 10.0kb downstream 10.0kb downstream 13178 true chr3: 49509858-49523035 Medicago truncatula
Medtr3g107360 10.0kb downstream 10.0kb downstream 10000 false chr3: 49509858-49519857 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780184 5273 Angiosperm View MSA
122296230 5265 Fabidae View MSA
124050775 5270 Rosid View MSA
123745391 5271 Pentapetalae View MSA
122771485 5272 Eudicot View MSA
121051807 5274 Embryophyte View MSA
123428505 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.047     Low Low
cufflinks 0.914        
cufflinks 0.635        
cufflinks 0.252        
cufflinks 1.038        
cufflinks 0.127     Low Low
cufflinks 0.314        
cufflinks 0.706        
cufflinks 0.683        

0 Strain