Gene : Medtr3g107320 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR18896:SF11 - PHOSPHOLIPASE D ALPHA 1-RELATED Description:  phospholipase D alpha 1
Genomic Order:  5936 Name:  ? Medtr3g107320
Secondary Identifier:  ? PAC:31054919
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPASYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3561 Medicago truncatula pathologic  
Mtruncatula PWY-7039 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g107320 0.5kb upstream 0.5kb upstream 4146 true chr3: 49508543-49512688 Medicago truncatula
Medtr3g107320 0.5kb upstream 0.5kb upstream 500 false chr3: 49512189-49512688 Medicago truncatula
Medtr3g107320 0.5kb downstream 0.5kb downstream 4146 true chr3: 49508043-49512188 Medicago truncatula
Medtr3g107320 0.5kb downstream 0.5kb downstream 500 false chr3: 49508043-49508542 Medicago truncatula
Medtr3g107320 1.0kb upstream 1.0kb upstream 4646 true chr3: 49508543-49513188 Medicago truncatula
Medtr3g107320 1.0kb upstream 1.0kb upstream 1000 false chr3: 49512189-49513188 Medicago truncatula
Medtr3g107320 1.0kb downstream 1.0kb downstream 4646 true chr3: 49507543-49512188 Medicago truncatula
Medtr3g107320 1.0kb downstream 1.0kb downstream 1000 false chr3: 49507543-49508542 Medicago truncatula
Medtr3g107320 2.0kb upstream 2.0kb upstream 5646 true chr3: 49508543-49514188 Medicago truncatula
Medtr3g107320 2.0kb upstream 2.0kb upstream 2000 false chr3: 49512189-49514188 Medicago truncatula
Medtr3g107320 2.0kb downstream 2.0kb downstream 5646 true chr3: 49506543-49512188 Medicago truncatula
Medtr3g107320 2.0kb downstream 2.0kb downstream 2000 false chr3: 49506543-49508542 Medicago truncatula
Medtr3g107320 5.0kb upstream 5.0kb upstream 8646 true chr3: 49508543-49517188 Medicago truncatula
Medtr3g107320 5.0kb upstream 5.0kb upstream 5000 false chr3: 49512189-49517188 Medicago truncatula
Medtr3g107320 5.0kb downstream 5.0kb downstream 8646 true chr3: 49503543-49512188 Medicago truncatula
Medtr3g107320 5.0kb downstream 5.0kb downstream 5000 false chr3: 49503543-49508542 Medicago truncatula
Medtr3g107320 10.0kb upstream 10.0kb upstream 13646 true chr3: 49508543-49522188 Medicago truncatula
Medtr3g107320 10.0kb upstream 10.0kb upstream 10000 false chr3: 49512189-49522188 Medicago truncatula
Medtr3g107320 10.0kb downstream 10.0kb downstream 13646 true chr3: 49498543-49512188 Medicago truncatula
Medtr3g107320 10.0kb downstream 10.0kb downstream 10000 false chr3: 49498543-49508542 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780184 5273 Angiosperm View MSA
122297028 5265 Fabidae View MSA
124050775 5270 Rosid View MSA
123745391 5271 Pentapetalae View MSA
122771485 5272 Eudicot View MSA
121051807 5274 Embryophyte View MSA
123428505 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.02     Low Low
cufflinks 0.264        
cufflinks 0.27        
cufflinks 0.147        
cufflinks 0.27        
cufflinks 0.129     Low  
cufflinks 0.221        
cufflinks 0.301        
cufflinks 0.276        

0 Strain