Gene : Medtr3g107090 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  5930
Name:  ? Medtr3g107090 Secondary Identifier:  ? PAC:31055824
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g107090 0.5kb upstream 0.5kb upstream 4325 true chr3: 49448631-49452955 Medicago truncatula
Medtr3g107090 0.5kb upstream 0.5kb upstream 500 false chr3: 49452456-49452955 Medicago truncatula
Medtr3g107090 0.5kb downstream 0.5kb downstream 4325 true chr3: 49448131-49452455 Medicago truncatula
Medtr3g107090 0.5kb downstream 0.5kb downstream 500 false chr3: 49448131-49448630 Medicago truncatula
Medtr3g107090 1.0kb upstream 1.0kb upstream 4825 true chr3: 49448631-49453455 Medicago truncatula
Medtr3g107090 1.0kb upstream 1.0kb upstream 1000 false chr3: 49452456-49453455 Medicago truncatula
Medtr3g107090 1.0kb downstream 1.0kb downstream 4825 true chr3: 49447631-49452455 Medicago truncatula
Medtr3g107090 1.0kb downstream 1.0kb downstream 1000 false chr3: 49447631-49448630 Medicago truncatula
Medtr3g107090 2.0kb upstream 2.0kb upstream 5825 true chr3: 49448631-49454455 Medicago truncatula
Medtr3g107090 2.0kb upstream 2.0kb upstream 2000 false chr3: 49452456-49454455 Medicago truncatula
Medtr3g107090 2.0kb downstream 2.0kb downstream 5825 true chr3: 49446631-49452455 Medicago truncatula
Medtr3g107090 2.0kb downstream 2.0kb downstream 2000 false chr3: 49446631-49448630 Medicago truncatula
Medtr3g107090 5.0kb upstream 5.0kb upstream 8825 true chr3: 49448631-49457455 Medicago truncatula
Medtr3g107090 5.0kb upstream 5.0kb upstream 5000 false chr3: 49452456-49457455 Medicago truncatula
Medtr3g107090 5.0kb downstream 5.0kb downstream 8825 true chr3: 49443631-49452455 Medicago truncatula
Medtr3g107090 5.0kb downstream 5.0kb downstream 5000 false chr3: 49443631-49448630 Medicago truncatula
Medtr3g107090 10.0kb upstream 10.0kb upstream 13825 true chr3: 49448631-49462455 Medicago truncatula
Medtr3g107090 10.0kb upstream 10.0kb upstream 10000 false chr3: 49452456-49462455 Medicago truncatula
Medtr3g107090 10.0kb downstream 10.0kb downstream 13825 true chr3: 49438631-49452455 Medicago truncatula
Medtr3g107090 10.0kb downstream 10.0kb downstream 10000 false chr3: 49438631-49448630 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027331 5273 Angiosperm View MSA
122310675 5265 Fabidae View MSA
124071040 5270 Rosid View MSA
123741524 5271 Pentapetalae View MSA
122770072 5272 Eudicot View MSA
121296997 5274 Embryophyte View MSA
123335098 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 73.825     High High
cufflinks 5.654        
cufflinks 28.07     High  
cufflinks 1.537       Low
cufflinks 4.149        
cufflinks 12.68     High  
cufflinks 14.616     High  
cufflinks 11.821     High  
cufflinks 10.694     High  

0 Strain