Gene : Medtr3g108020 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24078:SF266 - DNAJ HEAT SHOCK PROTEIN-RELATED Description:  DnaJ heat shock family protein
Genomic Order:  6003 Name:  ? Medtr3g108020
Secondary Identifier:  ? PAC:31058855
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g108020 0.5kb upstream 0.5kb upstream 2304 true chr3: 49915782-49918085 Medicago truncatula
Medtr3g108020 0.5kb upstream 0.5kb upstream 500 false chr3: 49917586-49918085 Medicago truncatula
Medtr3g108020 0.5kb downstream 0.5kb downstream 2304 true chr3: 49915282-49917585 Medicago truncatula
Medtr3g108020 0.5kb downstream 0.5kb downstream 500 false chr3: 49915282-49915781 Medicago truncatula
Medtr3g108020 1.0kb upstream 1.0kb upstream 2804 true chr3: 49915782-49918585 Medicago truncatula
Medtr3g108020 1.0kb upstream 1.0kb upstream 1000 false chr3: 49917586-49918585 Medicago truncatula
Medtr3g108020 1.0kb downstream 1.0kb downstream 2804 true chr3: 49914782-49917585 Medicago truncatula
Medtr3g108020 1.0kb downstream 1.0kb downstream 1000 false chr3: 49914782-49915781 Medicago truncatula
Medtr3g108020 2.0kb upstream 2.0kb upstream 3804 true chr3: 49915782-49919585 Medicago truncatula
Medtr3g108020 2.0kb upstream 2.0kb upstream 2000 false chr3: 49917586-49919585 Medicago truncatula
Medtr3g108020 2.0kb downstream 2.0kb downstream 3804 true chr3: 49913782-49917585 Medicago truncatula
Medtr3g108020 2.0kb downstream 2.0kb downstream 2000 false chr3: 49913782-49915781 Medicago truncatula
Medtr3g108020 5.0kb upstream 5.0kb upstream 6804 true chr3: 49915782-49922585 Medicago truncatula
Medtr3g108020 5.0kb upstream 5.0kb upstream 5000 false chr3: 49917586-49922585 Medicago truncatula
Medtr3g108020 5.0kb downstream 5.0kb downstream 6804 true chr3: 49910782-49917585 Medicago truncatula
Medtr3g108020 5.0kb downstream 5.0kb downstream 5000 false chr3: 49910782-49915781 Medicago truncatula
Medtr3g108020 10.0kb upstream 10.0kb upstream 11804 true chr3: 49915782-49927585 Medicago truncatula
Medtr3g108020 10.0kb upstream 10.0kb upstream 10000 false chr3: 49917586-49927585 Medicago truncatula
Medtr3g108020 10.0kb downstream 10.0kb downstream 11804 true chr3: 49905782-49917585 Medicago truncatula
Medtr3g108020 10.0kb downstream 10.0kb downstream 10000 false chr3: 49905782-49915781 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299736 5265 Fabidae View MSA
124061179 5270 Rosid View MSA
123739863 5271 Pentapetalae View MSA
122789363 5272 Eudicot View MSA
122051182 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.03     Low  
cufflinks 0.044     Low  
cufflinks 0.05     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain