Gene : Medtr3g107870 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR19241//PTHR19241:SF281 - ATP-BINDING CASSETTE TRANSPORTER Description:  drug resistance transporter-like ABC domain protein
Genomic Order:  5982 Name:  ? Medtr3g107870
Secondary Identifier:  ? PAC:31053913
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g107870 0.5kb upstream 0.5kb upstream 7981 true chr3: 49767624-49775604 Medicago truncatula
Medtr3g107870 0.5kb upstream 0.5kb upstream 500 false chr3: 49767624-49768123 Medicago truncatula
Medtr3g107870 0.5kb downstream 0.5kb downstream 7981 true chr3: 49768124-49776104 Medicago truncatula
Medtr3g107870 0.5kb downstream 0.5kb downstream 500 false chr3: 49775605-49776104 Medicago truncatula
Medtr3g107870 1.0kb upstream 1.0kb upstream 8481 true chr3: 49767124-49775604 Medicago truncatula
Medtr3g107870 1.0kb upstream 1.0kb upstream 1000 false chr3: 49767124-49768123 Medicago truncatula
Medtr3g107870 1.0kb downstream 1.0kb downstream 8481 true chr3: 49768124-49776604 Medicago truncatula
Medtr3g107870 1.0kb downstream 1.0kb downstream 1000 false chr3: 49775605-49776604 Medicago truncatula
Medtr3g107870 2.0kb upstream 2.0kb upstream 9481 true chr3: 49766124-49775604 Medicago truncatula
Medtr3g107870 2.0kb upstream 2.0kb upstream 2000 false chr3: 49766124-49768123 Medicago truncatula
Medtr3g107870 2.0kb downstream 2.0kb downstream 9481 true chr3: 49768124-49777604 Medicago truncatula
Medtr3g107870 2.0kb downstream 2.0kb downstream 2000 false chr3: 49775605-49777604 Medicago truncatula
Medtr3g107870 5.0kb upstream 5.0kb upstream 12481 true chr3: 49763124-49775604 Medicago truncatula
Medtr3g107870 5.0kb upstream 5.0kb upstream 5000 false chr3: 49763124-49768123 Medicago truncatula
Medtr3g107870 5.0kb downstream 5.0kb downstream 12481 true chr3: 49768124-49780604 Medicago truncatula
Medtr3g107870 5.0kb downstream 5.0kb downstream 5000 false chr3: 49775605-49780604 Medicago truncatula
Medtr3g107870 10.0kb upstream 10.0kb upstream 17481 true chr3: 49758124-49775604 Medicago truncatula
Medtr3g107870 10.0kb upstream 10.0kb upstream 10000 false chr3: 49758124-49768123 Medicago truncatula
Medtr3g107870 10.0kb downstream 10.0kb downstream 17481 true chr3: 49768124-49785604 Medicago truncatula
Medtr3g107870 10.0kb downstream 10.0kb downstream 10000 false chr3: 49775605-49785604 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041102 5273 Angiosperm View MSA
122300350 5265 Fabidae View MSA
124071105 5270 Rosid View MSA
123750377 5271 Pentapetalae View MSA
122791743 5272 Eudicot View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low  
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.4        
cufflinks 0.001     Low Low
cufflinks 0.569       High
cufflinks 0.183        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.081     Low  

0 Strain