Gene : Medtr3g107770 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22595//PTHR22595:SF47 - CHITINASE-RELATED Description:  rare lipoprotein A-like double-psi beta-barrel protein
Genomic Order:  5976 Name:  ? Medtr3g107770
Secondary Identifier:  ? PAC:31057807
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g107770 0.5kb upstream 0.5kb upstream 7232 true chr3: 49723558-49730789 Medicago truncatula
Medtr3g107770 0.5kb upstream 0.5kb upstream 500 false chr3: 49723558-49724057 Medicago truncatula
Medtr3g107770 0.5kb downstream 0.5kb downstream 7232 true chr3: 49724058-49731289 Medicago truncatula
Medtr3g107770 0.5kb downstream 0.5kb downstream 500 false chr3: 49730790-49731289 Medicago truncatula
Medtr3g107770 1.0kb upstream 1.0kb upstream 7732 true chr3: 49723058-49730789 Medicago truncatula
Medtr3g107770 1.0kb upstream 1.0kb upstream 1000 false chr3: 49723058-49724057 Medicago truncatula
Medtr3g107770 1.0kb downstream 1.0kb downstream 7732 true chr3: 49724058-49731789 Medicago truncatula
Medtr3g107770 1.0kb downstream 1.0kb downstream 1000 false chr3: 49730790-49731789 Medicago truncatula
Medtr3g107770 2.0kb upstream 2.0kb upstream 8732 true chr3: 49722058-49730789 Medicago truncatula
Medtr3g107770 2.0kb upstream 2.0kb upstream 2000 false chr3: 49722058-49724057 Medicago truncatula
Medtr3g107770 2.0kb downstream 2.0kb downstream 8732 true chr3: 49724058-49732789 Medicago truncatula
Medtr3g107770 2.0kb downstream 2.0kb downstream 2000 false chr3: 49730790-49732789 Medicago truncatula
Medtr3g107770 5.0kb upstream 5.0kb upstream 11732 true chr3: 49719058-49730789 Medicago truncatula
Medtr3g107770 5.0kb upstream 5.0kb upstream 5000 false chr3: 49719058-49724057 Medicago truncatula
Medtr3g107770 5.0kb downstream 5.0kb downstream 11732 true chr3: 49724058-49735789 Medicago truncatula
Medtr3g107770 5.0kb downstream 5.0kb downstream 5000 false chr3: 49730790-49735789 Medicago truncatula
Medtr3g107770 10.0kb upstream 10.0kb upstream 16732 true chr3: 49714058-49730789 Medicago truncatula
Medtr3g107770 10.0kb upstream 10.0kb upstream 10000 false chr3: 49714058-49724057 Medicago truncatula
Medtr3g107770 10.0kb downstream 10.0kb downstream 16732 true chr3: 49724058-49740789 Medicago truncatula
Medtr3g107770 10.0kb downstream 10.0kb downstream 10000 false chr3: 49730790-49740789 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302197 5265 Fabidae View MSA
124070009 5270 Rosid View MSA
123742328 5271 Pentapetalae View MSA
122795225 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.99        
cufflinks 0.815        
cufflinks 1.013        
cufflinks 3.199       High
cufflinks 0.771        
cufflinks 0.983        
cufflinks 3.065       High
cufflinks 0.703        
cufflinks 1.891        

0 Strain