Gene : Medtr3g108730 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13282:SF6 - PROTEIN FAM32A Description:  7-dehydrocholesterol reductase
Genomic Order:  6046 Name:  ? Medtr3g108730
Secondary Identifier:  ? PAC:31056162
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g108730 0.5kb upstream 0.5kb upstream 2602 true chr3: 50217233-50219834 Medicago truncatula
Medtr3g108730 0.5kb upstream 0.5kb upstream 500 false chr3: 50217233-50217732 Medicago truncatula
Medtr3g108730 0.5kb downstream 0.5kb downstream 2602 true chr3: 50217733-50220334 Medicago truncatula
Medtr3g108730 0.5kb downstream 0.5kb downstream 500 false chr3: 50219835-50220334 Medicago truncatula
Medtr3g108730 1.0kb upstream 1.0kb upstream 3102 true chr3: 50216733-50219834 Medicago truncatula
Medtr3g108730 1.0kb upstream 1.0kb upstream 1000 false chr3: 50216733-50217732 Medicago truncatula
Medtr3g108730 1.0kb downstream 1.0kb downstream 3102 true chr3: 50217733-50220834 Medicago truncatula
Medtr3g108730 1.0kb downstream 1.0kb downstream 1000 false chr3: 50219835-50220834 Medicago truncatula
Medtr3g108730 2.0kb upstream 2.0kb upstream 4102 true chr3: 50215733-50219834 Medicago truncatula
Medtr3g108730 2.0kb upstream 2.0kb upstream 2000 false chr3: 50215733-50217732 Medicago truncatula
Medtr3g108730 2.0kb downstream 2.0kb downstream 4102 true chr3: 50217733-50221834 Medicago truncatula
Medtr3g108730 2.0kb downstream 2.0kb downstream 2000 false chr3: 50219835-50221834 Medicago truncatula
Medtr3g108730 5.0kb upstream 5.0kb upstream 7102 true chr3: 50212733-50219834 Medicago truncatula
Medtr3g108730 5.0kb upstream 5.0kb upstream 5000 false chr3: 50212733-50217732 Medicago truncatula
Medtr3g108730 5.0kb downstream 5.0kb downstream 7102 true chr3: 50217733-50224834 Medicago truncatula
Medtr3g108730 5.0kb downstream 5.0kb downstream 5000 false chr3: 50219835-50224834 Medicago truncatula
Medtr3g108730 10.0kb upstream 10.0kb upstream 12102 true chr3: 50207733-50219834 Medicago truncatula
Medtr3g108730 10.0kb upstream 10.0kb upstream 10000 false chr3: 50207733-50217732 Medicago truncatula
Medtr3g108730 10.0kb downstream 10.0kb downstream 12102 true chr3: 50217733-50229834 Medicago truncatula
Medtr3g108730 10.0kb downstream 10.0kb downstream 10000 false chr3: 50219835-50229834 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302111 5265 Fabidae View MSA
124062928 5270 Rosid View MSA
123751058 5271 Pentapetalae View MSA
122788003 5272 Eudicot View MSA
122045426 5273 Angiosperm View MSA
121347666 5274 Embryophyte View MSA
123426193 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.269       High
cufflinks 0.146        
cufflinks 0.093       Low
cufflinks 0.493        
cufflinks 0.345        
cufflinks 2.605        
cufflinks 2.544        
cufflinks 0.036     Low Low
cufflinks 1.42        

0 Strain