Gene : Medtr3g108530 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR16441 - FIDIPIDINE Description:  paramyosin-like protein
Genomic Order:  5992 Name:  ? Medtr3g108530
Secondary Identifier:  ? PAC:31056739
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g108530 0.5kb upstream 0.5kb upstream 6567 true chr3: 49839817-49846383 Medicago truncatula
Medtr3g108530 0.5kb upstream 0.5kb upstream 500 false chr3: 49839817-49840316 Medicago truncatula
Medtr3g108530 0.5kb downstream 0.5kb downstream 6567 true chr3: 49840317-49846883 Medicago truncatula
Medtr3g108530 0.5kb downstream 0.5kb downstream 500 false chr3: 49846384-49846883 Medicago truncatula
Medtr3g108530 1.0kb upstream 1.0kb upstream 7067 true chr3: 49839317-49846383 Medicago truncatula
Medtr3g108530 1.0kb upstream 1.0kb upstream 1000 false chr3: 49839317-49840316 Medicago truncatula
Medtr3g108530 1.0kb downstream 1.0kb downstream 7067 true chr3: 49840317-49847383 Medicago truncatula
Medtr3g108530 1.0kb downstream 1.0kb downstream 1000 false chr3: 49846384-49847383 Medicago truncatula
Medtr3g108530 2.0kb upstream 2.0kb upstream 8067 true chr3: 49838317-49846383 Medicago truncatula
Medtr3g108530 2.0kb upstream 2.0kb upstream 2000 false chr3: 49838317-49840316 Medicago truncatula
Medtr3g108530 2.0kb downstream 2.0kb downstream 8067 true chr3: 49840317-49848383 Medicago truncatula
Medtr3g108530 2.0kb downstream 2.0kb downstream 2000 false chr3: 49846384-49848383 Medicago truncatula
Medtr3g108530 5.0kb upstream 5.0kb upstream 11067 true chr3: 49835317-49846383 Medicago truncatula
Medtr3g108530 5.0kb upstream 5.0kb upstream 5000 false chr3: 49835317-49840316 Medicago truncatula
Medtr3g108530 5.0kb downstream 5.0kb downstream 11067 true chr3: 49840317-49851383 Medicago truncatula
Medtr3g108530 5.0kb downstream 5.0kb downstream 5000 false chr3: 49846384-49851383 Medicago truncatula
Medtr3g108530 10.0kb upstream 10.0kb upstream 16067 true chr3: 49830317-49846383 Medicago truncatula
Medtr3g108530 10.0kb upstream 10.0kb upstream 10000 false chr3: 49830317-49840316 Medicago truncatula
Medtr3g108530 10.0kb downstream 10.0kb downstream 16067 true chr3: 49840317-49856383 Medicago truncatula
Medtr3g108530 10.0kb downstream 10.0kb downstream 10000 false chr3: 49846384-49856383 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312949 5265 Fabidae View MSA
124067855 5270 Rosid View MSA
123739258 5271 Pentapetalae View MSA
122792761 5272 Eudicot View MSA
122049563 5273 Angiosperm View MSA
121349133 5274 Embryophyte View MSA
123381184 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.858        
cufflinks 1.199        
cufflinks 1.591       High
cufflinks 0.264       Low
cufflinks 1.721       High
cufflinks 0.236       Low
cufflinks 0.574        
cufflinks 1.14        
cufflinks 0.381        

0 Strain