Gene : Medtr3g108660 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG1863 - Ubiquitin carboxyl-terminal hydrolase Description:  ubiquitin carboxyl-terminal hydrolase
Genomic Order:  6041 Name:  ? Medtr3g108660
Secondary Identifier:  ? PAC:31054721
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g108660 0.5kb upstream 0.5kb upstream 11211 true chr3: 50179265-50190475 Medicago truncatula
Medtr3g108660 0.5kb upstream 0.5kb upstream 500 false chr3: 50189976-50190475 Medicago truncatula
Medtr3g108660 0.5kb downstream 0.5kb downstream 11211 true chr3: 50178765-50189975 Medicago truncatula
Medtr3g108660 0.5kb downstream 0.5kb downstream 500 false chr3: 50178765-50179264 Medicago truncatula
Medtr3g108660 1.0kb upstream 1.0kb upstream 11711 true chr3: 50179265-50190975 Medicago truncatula
Medtr3g108660 1.0kb upstream 1.0kb upstream 1000 false chr3: 50189976-50190975 Medicago truncatula
Medtr3g108660 1.0kb downstream 1.0kb downstream 11711 true chr3: 50178265-50189975 Medicago truncatula
Medtr3g108660 1.0kb downstream 1.0kb downstream 1000 false chr3: 50178265-50179264 Medicago truncatula
Medtr3g108660 2.0kb upstream 2.0kb upstream 12711 true chr3: 50179265-50191975 Medicago truncatula
Medtr3g108660 2.0kb upstream 2.0kb upstream 2000 false chr3: 50189976-50191975 Medicago truncatula
Medtr3g108660 2.0kb downstream 2.0kb downstream 12711 true chr3: 50177265-50189975 Medicago truncatula
Medtr3g108660 2.0kb downstream 2.0kb downstream 2000 false chr3: 50177265-50179264 Medicago truncatula
Medtr3g108660 5.0kb upstream 5.0kb upstream 15711 true chr3: 50179265-50194975 Medicago truncatula
Medtr3g108660 5.0kb upstream 5.0kb upstream 5000 false chr3: 50189976-50194975 Medicago truncatula
Medtr3g108660 5.0kb downstream 5.0kb downstream 15711 true chr3: 50174265-50189975 Medicago truncatula
Medtr3g108660 5.0kb downstream 5.0kb downstream 5000 false chr3: 50174265-50179264 Medicago truncatula
Medtr3g108660 10.0kb upstream 10.0kb upstream 20711 true chr3: 50179265-50199975 Medicago truncatula
Medtr3g108660 10.0kb upstream 10.0kb upstream 10000 false chr3: 50189976-50199975 Medicago truncatula
Medtr3g108660 10.0kb downstream 10.0kb downstream 20711 true chr3: 50169265-50189975 Medicago truncatula
Medtr3g108660 10.0kb downstream 10.0kb downstream 10000 false chr3: 50169265-50179264 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309346 5265 Fabidae View MSA
124061105 5270 Rosid View MSA
123737651 5271 Pentapetalae View MSA
122791193 5272 Eudicot View MSA
122043849 5273 Angiosperm View MSA
121347383 5274 Embryophyte View MSA
123427406 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.028       High
cufflinks 1.569        
cufflinks 1.719        
cufflinks 0.725        
cufflinks 1.725        
cufflinks 0.426       Low
cufflinks 1.282        
cufflinks 1.471        
cufflinks 0.823        

0 Strain