Gene : Medtr3g108630 M. truncatula Mt4.0v1
Defline:  (1 of 19) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Description:  transmembrane protein, putative
Genomic Order:  6038 Name:  ? Medtr3g108630
Secondary Identifier:  ? PAC:31053990
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g108630 0.5kb upstream 0.5kb upstream 2548 true chr3: 50158469-50161016 Medicago truncatula
Medtr3g108630 0.5kb upstream 0.5kb upstream 500 false chr3: 50158469-50158968 Medicago truncatula
Medtr3g108630 0.5kb downstream 0.5kb downstream 2548 true chr3: 50158969-50161516 Medicago truncatula
Medtr3g108630 0.5kb downstream 0.5kb downstream 500 false chr3: 50161017-50161516 Medicago truncatula
Medtr3g108630 1.0kb upstream 1.0kb upstream 3048 true chr3: 50157969-50161016 Medicago truncatula
Medtr3g108630 1.0kb upstream 1.0kb upstream 1000 false chr3: 50157969-50158968 Medicago truncatula
Medtr3g108630 1.0kb downstream 1.0kb downstream 3048 true chr3: 50158969-50162016 Medicago truncatula
Medtr3g108630 1.0kb downstream 1.0kb downstream 1000 false chr3: 50161017-50162016 Medicago truncatula
Medtr3g108630 2.0kb upstream 2.0kb upstream 4048 true chr3: 50156969-50161016 Medicago truncatula
Medtr3g108630 2.0kb upstream 2.0kb upstream 2000 false chr3: 50156969-50158968 Medicago truncatula
Medtr3g108630 2.0kb downstream 2.0kb downstream 4048 true chr3: 50158969-50163016 Medicago truncatula
Medtr3g108630 2.0kb downstream 2.0kb downstream 2000 false chr3: 50161017-50163016 Medicago truncatula
Medtr3g108630 5.0kb upstream 5.0kb upstream 7048 true chr3: 50153969-50161016 Medicago truncatula
Medtr3g108630 5.0kb upstream 5.0kb upstream 5000 false chr3: 50153969-50158968 Medicago truncatula
Medtr3g108630 5.0kb downstream 5.0kb downstream 7048 true chr3: 50158969-50166016 Medicago truncatula
Medtr3g108630 5.0kb downstream 5.0kb downstream 5000 false chr3: 50161017-50166016 Medicago truncatula
Medtr3g108630 10.0kb upstream 10.0kb upstream 12048 true chr3: 50148969-50161016 Medicago truncatula
Medtr3g108630 10.0kb upstream 10.0kb upstream 10000 false chr3: 50148969-50158968 Medicago truncatula
Medtr3g108630 10.0kb downstream 10.0kb downstream 12048 true chr3: 50158969-50171016 Medicago truncatula
Medtr3g108630 10.0kb downstream 10.0kb downstream 10000 false chr3: 50161017-50171016 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041222 5273 Angiosperm View MSA
122299842 5265 Fabidae View MSA
124061331 5270 Rosid View MSA
123737344 5271 Pentapetalae View MSA
122792572 5272 Eudicot View MSA
121350312 5274 Embryophyte View MSA
123381673 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.485        
cufflinks 8.513        
cufflinks 6.774        
cufflinks 13.765     High High
cufflinks 8.309        
cufflinks 6.697        
cufflinks 5.348        
cufflinks 4.591       Low
cufflinks 7.706        

0 Strain