Gene : Medtr3g108280 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG0815 - 60S acidic ribosomal protein P0 Description:  60S acidic ribosomal protein P0-1
Genomic Order:  6020 Name:  ? Medtr3g108280
Secondary Identifier:  ? PAC:31058295
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g108280 0.5kb upstream 0.5kb upstream 3222 true chr3: 50020685-50023906 Medicago truncatula
Medtr3g108280 0.5kb upstream 0.5kb upstream 500 false chr3: 50020685-50021184 Medicago truncatula
Medtr3g108280 0.5kb downstream 0.5kb downstream 3222 true chr3: 50021185-50024406 Medicago truncatula
Medtr3g108280 0.5kb downstream 0.5kb downstream 500 false chr3: 50023907-50024406 Medicago truncatula
Medtr3g108280 1.0kb upstream 1.0kb upstream 3722 true chr3: 50020185-50023906 Medicago truncatula
Medtr3g108280 1.0kb upstream 1.0kb upstream 1000 false chr3: 50020185-50021184 Medicago truncatula
Medtr3g108280 1.0kb downstream 1.0kb downstream 3722 true chr3: 50021185-50024906 Medicago truncatula
Medtr3g108280 1.0kb downstream 1.0kb downstream 1000 false chr3: 50023907-50024906 Medicago truncatula
Medtr3g108280 2.0kb upstream 2.0kb upstream 4722 true chr3: 50019185-50023906 Medicago truncatula
Medtr3g108280 2.0kb upstream 2.0kb upstream 2000 false chr3: 50019185-50021184 Medicago truncatula
Medtr3g108280 2.0kb downstream 2.0kb downstream 4722 true chr3: 50021185-50025906 Medicago truncatula
Medtr3g108280 2.0kb downstream 2.0kb downstream 2000 false chr3: 50023907-50025906 Medicago truncatula
Medtr3g108280 5.0kb upstream 5.0kb upstream 7722 true chr3: 50016185-50023906 Medicago truncatula
Medtr3g108280 5.0kb upstream 5.0kb upstream 5000 false chr3: 50016185-50021184 Medicago truncatula
Medtr3g108280 5.0kb downstream 5.0kb downstream 7722 true chr3: 50021185-50028906 Medicago truncatula
Medtr3g108280 5.0kb downstream 5.0kb downstream 5000 false chr3: 50023907-50028906 Medicago truncatula
Medtr3g108280 10.0kb upstream 10.0kb upstream 12722 true chr3: 50011185-50023906 Medicago truncatula
Medtr3g108280 10.0kb upstream 10.0kb upstream 10000 false chr3: 50011185-50021184 Medicago truncatula
Medtr3g108280 10.0kb downstream 10.0kb downstream 12722 true chr3: 50021185-50033906 Medicago truncatula
Medtr3g108280 10.0kb downstream 10.0kb downstream 10000 false chr3: 50023907-50033906 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306740 5265 Fabidae View MSA
124061567 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.675     High Low
cufflinks 38.653     High  
cufflinks 37.305     High  
cufflinks 181.603     High High
cufflinks 84.083     High  
cufflinks 99.371     High  
cufflinks 54.708     High  
cufflinks 41.589     High  
cufflinks 124.147     High High

0 Strain