Gene : Medtr3g108460 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23342 - N-ACETYLGLUTAMATE SYNTHASE Description:  N-acetylglutamate kinase
Genomic Order:  6034 Name:  ? Medtr3g108460
Secondary Identifier:  ? PAC:31056979
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ARGSYNBSUB-PWY Medicago truncatula pathologic  
Mtruncatula ARGSYN-PWY Medicago truncatula pathologic  
Mtruncatula GLUTORN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g108460 0.5kb upstream 0.5kb upstream 1904 true chr3: 50119129-50121032 Medicago truncatula
Medtr3g108460 0.5kb upstream 0.5kb upstream 500 false chr3: 50120533-50121032 Medicago truncatula
Medtr3g108460 0.5kb downstream 0.5kb downstream 1904 true chr3: 50118629-50120532 Medicago truncatula
Medtr3g108460 0.5kb downstream 0.5kb downstream 500 false chr3: 50118629-50119128 Medicago truncatula
Medtr3g108460 1.0kb upstream 1.0kb upstream 2404 true chr3: 50119129-50121532 Medicago truncatula
Medtr3g108460 1.0kb upstream 1.0kb upstream 1000 false chr3: 50120533-50121532 Medicago truncatula
Medtr3g108460 1.0kb downstream 1.0kb downstream 2404 true chr3: 50118129-50120532 Medicago truncatula
Medtr3g108460 1.0kb downstream 1.0kb downstream 1000 false chr3: 50118129-50119128 Medicago truncatula
Medtr3g108460 2.0kb upstream 2.0kb upstream 3404 true chr3: 50119129-50122532 Medicago truncatula
Medtr3g108460 2.0kb upstream 2.0kb upstream 2000 false chr3: 50120533-50122532 Medicago truncatula
Medtr3g108460 2.0kb downstream 2.0kb downstream 3404 true chr3: 50117129-50120532 Medicago truncatula
Medtr3g108460 2.0kb downstream 2.0kb downstream 2000 false chr3: 50117129-50119128 Medicago truncatula
Medtr3g108460 5.0kb upstream 5.0kb upstream 6404 true chr3: 50119129-50125532 Medicago truncatula
Medtr3g108460 5.0kb upstream 5.0kb upstream 5000 false chr3: 50120533-50125532 Medicago truncatula
Medtr3g108460 5.0kb downstream 5.0kb downstream 6404 true chr3: 50114129-50120532 Medicago truncatula
Medtr3g108460 5.0kb downstream 5.0kb downstream 5000 false chr3: 50114129-50119128 Medicago truncatula
Medtr3g108460 10.0kb upstream 10.0kb upstream 11404 true chr3: 50119129-50130532 Medicago truncatula
Medtr3g108460 10.0kb upstream 10.0kb upstream 10000 false chr3: 50120533-50130532 Medicago truncatula
Medtr3g108460 10.0kb downstream 10.0kb downstream 11404 true chr3: 50109129-50120532 Medicago truncatula
Medtr3g108460 10.0kb downstream 10.0kb downstream 10000 false chr3: 50109129-50119128 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301730 5265 Fabidae View MSA
124062864 5270 Rosid View MSA
123739875 5271 Pentapetalae View MSA
122792416 5272 Eudicot View MSA
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.866       Low
cufflinks 11.869     High  
cufflinks 11.318     High  
cufflinks 32.327     High High
cufflinks 16.61     High  
cufflinks 21.127     High  
cufflinks 11.743     High  
cufflinks 8.865       Low
cufflinks 18.991     High  

0 Strain