Gene : Medtr3g108160 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR19957:SF116 - SYNTAXIN-32 Description:  syntaxin of plants protein
Genomic Order:  6012 Name:  ? Medtr3g108160
Secondary Identifier:  ? PAC:31057482
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g108160 0.5kb upstream 0.5kb upstream 4498 true chr3: 49979202-49983699 Medicago truncatula
Medtr3g108160 0.5kb upstream 0.5kb upstream 500 false chr3: 49983200-49983699 Medicago truncatula
Medtr3g108160 0.5kb downstream 0.5kb downstream 4498 true chr3: 49978702-49983199 Medicago truncatula
Medtr3g108160 0.5kb downstream 0.5kb downstream 500 false chr3: 49978702-49979201 Medicago truncatula
Medtr3g108160 1.0kb upstream 1.0kb upstream 4998 true chr3: 49979202-49984199 Medicago truncatula
Medtr3g108160 1.0kb upstream 1.0kb upstream 1000 false chr3: 49983200-49984199 Medicago truncatula
Medtr3g108160 1.0kb downstream 1.0kb downstream 4998 true chr3: 49978202-49983199 Medicago truncatula
Medtr3g108160 1.0kb downstream 1.0kb downstream 1000 false chr3: 49978202-49979201 Medicago truncatula
Medtr3g108160 2.0kb upstream 2.0kb upstream 5998 true chr3: 49979202-49985199 Medicago truncatula
Medtr3g108160 2.0kb upstream 2.0kb upstream 2000 false chr3: 49983200-49985199 Medicago truncatula
Medtr3g108160 2.0kb downstream 2.0kb downstream 5998 true chr3: 49977202-49983199 Medicago truncatula
Medtr3g108160 2.0kb downstream 2.0kb downstream 2000 false chr3: 49977202-49979201 Medicago truncatula
Medtr3g108160 5.0kb upstream 5.0kb upstream 8998 true chr3: 49979202-49988199 Medicago truncatula
Medtr3g108160 5.0kb upstream 5.0kb upstream 5000 false chr3: 49983200-49988199 Medicago truncatula
Medtr3g108160 5.0kb downstream 5.0kb downstream 8998 true chr3: 49974202-49983199 Medicago truncatula
Medtr3g108160 5.0kb downstream 5.0kb downstream 5000 false chr3: 49974202-49979201 Medicago truncatula
Medtr3g108160 10.0kb upstream 10.0kb upstream 13998 true chr3: 49979202-49993199 Medicago truncatula
Medtr3g108160 10.0kb upstream 10.0kb upstream 10000 false chr3: 49983200-49993199 Medicago truncatula
Medtr3g108160 10.0kb downstream 10.0kb downstream 13998 true chr3: 49969202-49983199 Medicago truncatula
Medtr3g108160 10.0kb downstream 10.0kb downstream 10000 false chr3: 49969202-49979201 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311439 5265 Fabidae View MSA
124069963 5270 Rosid View MSA
123741703 5271 Pentapetalae View MSA
122789258 5272 Eudicot View MSA
122042790 5273 Angiosperm View MSA
121345451 5274 Embryophyte View MSA
123424461 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.494        
cufflinks 5.253        
cufflinks 4.068        
cufflinks 5.26       High
cufflinks 4.947        
cufflinks 3.967        
cufflinks 4.436        
cufflinks 3.524       Low
cufflinks 5.32       High

0 Strain