Gene : Medtr4g021470 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11624:SF21 - 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA, MITOCHONDRIAL Description:  branched chain alpha-keto acid dehydrogenase E1 beta subunit
Genomic Order:  926 Name:  ? Medtr4g021470
Secondary Identifier:  ? PAC:31108961
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5046 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g021470 0.5kb upstream 0.5kb upstream 6454 true chr4: 6984927-6991380 Medicago truncatula
Medtr4g021470 0.5kb upstream 0.5kb upstream 500 false chr4: 6990881-6991380 Medicago truncatula
Medtr4g021470 0.5kb downstream 0.5kb downstream 6454 true chr4: 6984427-6990880 Medicago truncatula
Medtr4g021470 0.5kb downstream 0.5kb downstream 500 false chr4: 6984427-6984926 Medicago truncatula
Medtr4g021470 1.0kb upstream 1.0kb upstream 6954 true chr4: 6984927-6991880 Medicago truncatula
Medtr4g021470 1.0kb upstream 1.0kb upstream 1000 false chr4: 6990881-6991880 Medicago truncatula
Medtr4g021470 1.0kb downstream 1.0kb downstream 6954 true chr4: 6983927-6990880 Medicago truncatula
Medtr4g021470 1.0kb downstream 1.0kb downstream 1000 false chr4: 6983927-6984926 Medicago truncatula
Medtr4g021470 2.0kb upstream 2.0kb upstream 7954 true chr4: 6984927-6992880 Medicago truncatula
Medtr4g021470 2.0kb upstream 2.0kb upstream 2000 false chr4: 6990881-6992880 Medicago truncatula
Medtr4g021470 2.0kb downstream 2.0kb downstream 7954 true chr4: 6982927-6990880 Medicago truncatula
Medtr4g021470 2.0kb downstream 2.0kb downstream 2000 false chr4: 6982927-6984926 Medicago truncatula
Medtr4g021470 5.0kb upstream 5.0kb upstream 10954 true chr4: 6984927-6995880 Medicago truncatula
Medtr4g021470 5.0kb upstream 5.0kb upstream 5000 false chr4: 6990881-6995880 Medicago truncatula
Medtr4g021470 5.0kb downstream 5.0kb downstream 10954 true chr4: 6979927-6990880 Medicago truncatula
Medtr4g021470 5.0kb downstream 5.0kb downstream 5000 false chr4: 6979927-6984926 Medicago truncatula
Medtr4g021470 10.0kb upstream 10.0kb upstream 15954 true chr4: 6984927-7000880 Medicago truncatula
Medtr4g021470 10.0kb upstream 10.0kb upstream 10000 false chr4: 6990881-7000880 Medicago truncatula
Medtr4g021470 10.0kb downstream 10.0kb downstream 15954 true chr4: 6974927-6990880 Medicago truncatula
Medtr4g021470 10.0kb downstream 10.0kb downstream 10000 false chr4: 6974927-6984926 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309048 5265 Fabidae View MSA
124067270 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.416     High  
cufflinks 31.424     High  
cufflinks 57.155     High High
cufflinks 18.122     High  
cufflinks 24.607     High  
cufflinks 11.078     High Low
cufflinks 14.371     High  
cufflinks 52.073     High High
cufflinks 9.764       Low

0 Strain