Gene : Medtr4g021220 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  908 Name:  ? Medtr4g021220
Secondary Identifier:  ? PAC:31108869
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g021220 0.5kb upstream 0.5kb upstream 1983 true chr4: 6856754-6858736 Medicago truncatula
Medtr4g021220 0.5kb upstream 0.5kb upstream 500 false chr4: 6856754-6857253 Medicago truncatula
Medtr4g021220 0.5kb downstream 0.5kb downstream 1983 true chr4: 6857254-6859236 Medicago truncatula
Medtr4g021220 0.5kb downstream 0.5kb downstream 500 false chr4: 6858737-6859236 Medicago truncatula
Medtr4g021220 1.0kb upstream 1.0kb upstream 2483 true chr4: 6856254-6858736 Medicago truncatula
Medtr4g021220 1.0kb upstream 1.0kb upstream 1000 false chr4: 6856254-6857253 Medicago truncatula
Medtr4g021220 1.0kb downstream 1.0kb downstream 2483 true chr4: 6857254-6859736 Medicago truncatula
Medtr4g021220 1.0kb downstream 1.0kb downstream 1000 false chr4: 6858737-6859736 Medicago truncatula
Medtr4g021220 2.0kb upstream 2.0kb upstream 3483 true chr4: 6855254-6858736 Medicago truncatula
Medtr4g021220 2.0kb upstream 2.0kb upstream 2000 false chr4: 6855254-6857253 Medicago truncatula
Medtr4g021220 2.0kb downstream 2.0kb downstream 3483 true chr4: 6857254-6860736 Medicago truncatula
Medtr4g021220 2.0kb downstream 2.0kb downstream 2000 false chr4: 6858737-6860736 Medicago truncatula
Medtr4g021220 5.0kb upstream 5.0kb upstream 6483 true chr4: 6852254-6858736 Medicago truncatula
Medtr4g021220 5.0kb upstream 5.0kb upstream 5000 false chr4: 6852254-6857253 Medicago truncatula
Medtr4g021220 5.0kb downstream 5.0kb downstream 6483 true chr4: 6857254-6863736 Medicago truncatula
Medtr4g021220 5.0kb downstream 5.0kb downstream 5000 false chr4: 6858737-6863736 Medicago truncatula
Medtr4g021220 10.0kb upstream 10.0kb upstream 11483 true chr4: 6847254-6858736 Medicago truncatula
Medtr4g021220 10.0kb upstream 10.0kb upstream 10000 false chr4: 6847254-6857253 Medicago truncatula
Medtr4g021220 10.0kb downstream 10.0kb downstream 11483 true chr4: 6857254-6868736 Medicago truncatula
Medtr4g021220 10.0kb downstream 10.0kb downstream 10000 false chr4: 6858737-6868736 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302359 5265 Fabidae View MSA
124066946 5270 Rosid View MSA
123748514 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.55        
cufflinks 2.779        
cufflinks 3.468        
cufflinks 0.671       Low
cufflinks 4.64        
cufflinks 0.297       Low
cufflinks 2.543        
cufflinks 2.759        
cufflinks 2.338        

0 Strain