Gene : Medtr4g021260 M. truncatula Mt4.0v1
Defline:  (1 of 15) PF05003 - Protein of unknown function (DUF668) (DUF668) Description:  Avr9/Cf-9 rapidly elicited protein
Genomic Order:  909 Name:  ? Medtr4g021260
Secondary Identifier:  ? PAC:31110765
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g021260 0.5kb upstream 0.5kb upstream 2412 true chr4: 6876835-6879246 Medicago truncatula
Medtr4g021260 0.5kb upstream 0.5kb upstream 500 false chr4: 6876835-6877334 Medicago truncatula
Medtr4g021260 0.5kb downstream 0.5kb downstream 2412 true chr4: 6877335-6879746 Medicago truncatula
Medtr4g021260 0.5kb downstream 0.5kb downstream 500 false chr4: 6879247-6879746 Medicago truncatula
Medtr4g021260 1.0kb upstream 1.0kb upstream 2912 true chr4: 6876335-6879246 Medicago truncatula
Medtr4g021260 1.0kb upstream 1.0kb upstream 1000 false chr4: 6876335-6877334 Medicago truncatula
Medtr4g021260 1.0kb downstream 1.0kb downstream 2912 true chr4: 6877335-6880246 Medicago truncatula
Medtr4g021260 1.0kb downstream 1.0kb downstream 1000 false chr4: 6879247-6880246 Medicago truncatula
Medtr4g021260 2.0kb upstream 2.0kb upstream 3912 true chr4: 6875335-6879246 Medicago truncatula
Medtr4g021260 2.0kb upstream 2.0kb upstream 2000 false chr4: 6875335-6877334 Medicago truncatula
Medtr4g021260 2.0kb downstream 2.0kb downstream 3912 true chr4: 6877335-6881246 Medicago truncatula
Medtr4g021260 2.0kb downstream 2.0kb downstream 2000 false chr4: 6879247-6881246 Medicago truncatula
Medtr4g021260 5.0kb upstream 5.0kb upstream 6912 true chr4: 6872335-6879246 Medicago truncatula
Medtr4g021260 5.0kb upstream 5.0kb upstream 5000 false chr4: 6872335-6877334 Medicago truncatula
Medtr4g021260 5.0kb downstream 5.0kb downstream 6912 true chr4: 6877335-6884246 Medicago truncatula
Medtr4g021260 5.0kb downstream 5.0kb downstream 5000 false chr4: 6879247-6884246 Medicago truncatula
Medtr4g021260 10.0kb upstream 10.0kb upstream 11912 true chr4: 6867335-6879246 Medicago truncatula
Medtr4g021260 10.0kb upstream 10.0kb upstream 10000 false chr4: 6867335-6877334 Medicago truncatula
Medtr4g021260 10.0kb downstream 10.0kb downstream 11912 true chr4: 6877335-6889246 Medicago truncatula
Medtr4g021260 10.0kb downstream 10.0kb downstream 10000 false chr4: 6879247-6889246 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296456 5265 Fabidae View MSA
124069721 5270 Rosid View MSA
123751095 5271 Pentapetalae View MSA
122796235 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.913     High High
cufflinks 0.087       Low
cufflinks 0.326        
cufflinks 2.518        
cufflinks 0.137       Low
cufflinks 13.974     High High
cufflinks 5.211        
cufflinks 0.187        
cufflinks 3.095        

0 Strain