Gene : Medtr4g021340 M. truncatula Mt4.0v1
Defline:  (1 of 41) PF04535 - Domain of unknown function (DUF588) (DUF588) Description:  CASP-like protein
Genomic Order:  916 Name:  ? Medtr4g021340
Secondary Identifier:  ? PAC:31110594
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g021340 0.5kb upstream 0.5kb upstream 5721 true chr4: 6915192-6920912 Medicago truncatula
Medtr4g021340 0.5kb upstream 0.5kb upstream 500 false chr4: 6920413-6920912 Medicago truncatula
Medtr4g021340 0.5kb downstream 0.5kb downstream 5721 true chr4: 6914692-6920412 Medicago truncatula
Medtr4g021340 0.5kb downstream 0.5kb downstream 500 false chr4: 6914692-6915191 Medicago truncatula
Medtr4g021340 1.0kb upstream 1.0kb upstream 6221 true chr4: 6915192-6921412 Medicago truncatula
Medtr4g021340 1.0kb upstream 1.0kb upstream 1000 false chr4: 6920413-6921412 Medicago truncatula
Medtr4g021340 1.0kb downstream 1.0kb downstream 6221 true chr4: 6914192-6920412 Medicago truncatula
Medtr4g021340 1.0kb downstream 1.0kb downstream 1000 false chr4: 6914192-6915191 Medicago truncatula
Medtr4g021340 2.0kb upstream 2.0kb upstream 7221 true chr4: 6915192-6922412 Medicago truncatula
Medtr4g021340 2.0kb upstream 2.0kb upstream 2000 false chr4: 6920413-6922412 Medicago truncatula
Medtr4g021340 2.0kb downstream 2.0kb downstream 7221 true chr4: 6913192-6920412 Medicago truncatula
Medtr4g021340 2.0kb downstream 2.0kb downstream 2000 false chr4: 6913192-6915191 Medicago truncatula
Medtr4g021340 5.0kb upstream 5.0kb upstream 10221 true chr4: 6915192-6925412 Medicago truncatula
Medtr4g021340 5.0kb upstream 5.0kb upstream 5000 false chr4: 6920413-6925412 Medicago truncatula
Medtr4g021340 5.0kb downstream 5.0kb downstream 10221 true chr4: 6910192-6920412 Medicago truncatula
Medtr4g021340 5.0kb downstream 5.0kb downstream 5000 false chr4: 6910192-6915191 Medicago truncatula
Medtr4g021340 10.0kb upstream 10.0kb upstream 15221 true chr4: 6915192-6930412 Medicago truncatula
Medtr4g021340 10.0kb upstream 10.0kb upstream 10000 false chr4: 6920413-6930412 Medicago truncatula
Medtr4g021340 10.0kb downstream 10.0kb downstream 15221 true chr4: 6905192-6920412 Medicago truncatula
Medtr4g021340 10.0kb downstream 10.0kb downstream 10000 false chr4: 6905192-6915191 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299878 5265 Fabidae View MSA
124063057 5270 Rosid View MSA
123740553 5271 Pentapetalae View MSA
122796755 5272 Eudicot View MSA
122043867 5273 Angiosperm View MSA
121310202 5274 Embryophyte View MSA
123347759 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.393        
cufflinks 1.1        
cufflinks 1.014        
cufflinks 1.768       High
cufflinks 1.376        
cufflinks 1.091        
cufflinks 1.355        
cufflinks 0.845       Low
cufflinks 1.157        

0 Strain