Gene : Medtr4g021290 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR11831//PTHR11831:SF13 - 30S 40S RIBOSOMAL PROTEIN Description:  40S ribosomal S9-like protein
Genomic Order:  913 Name:  ? Medtr4g021290
Secondary Identifier:  ? PAC:31106915
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g021290 0.5kb upstream 0.5kb upstream 2435 true chr4: 6899807-6902241 Medicago truncatula
Medtr4g021290 0.5kb upstream 0.5kb upstream 500 false chr4: 6899807-6900306 Medicago truncatula
Medtr4g021290 0.5kb downstream 0.5kb downstream 2435 true chr4: 6900307-6902741 Medicago truncatula
Medtr4g021290 0.5kb downstream 0.5kb downstream 500 false chr4: 6902242-6902741 Medicago truncatula
Medtr4g021290 1.0kb upstream 1.0kb upstream 2935 true chr4: 6899307-6902241 Medicago truncatula
Medtr4g021290 1.0kb upstream 1.0kb upstream 1000 false chr4: 6899307-6900306 Medicago truncatula
Medtr4g021290 1.0kb downstream 1.0kb downstream 2935 true chr4: 6900307-6903241 Medicago truncatula
Medtr4g021290 1.0kb downstream 1.0kb downstream 1000 false chr4: 6902242-6903241 Medicago truncatula
Medtr4g021290 2.0kb upstream 2.0kb upstream 3935 true chr4: 6898307-6902241 Medicago truncatula
Medtr4g021290 2.0kb upstream 2.0kb upstream 2000 false chr4: 6898307-6900306 Medicago truncatula
Medtr4g021290 2.0kb downstream 2.0kb downstream 3935 true chr4: 6900307-6904241 Medicago truncatula
Medtr4g021290 2.0kb downstream 2.0kb downstream 2000 false chr4: 6902242-6904241 Medicago truncatula
Medtr4g021290 5.0kb upstream 5.0kb upstream 6935 true chr4: 6895307-6902241 Medicago truncatula
Medtr4g021290 5.0kb upstream 5.0kb upstream 5000 false chr4: 6895307-6900306 Medicago truncatula
Medtr4g021290 5.0kb downstream 5.0kb downstream 6935 true chr4: 6900307-6907241 Medicago truncatula
Medtr4g021290 5.0kb downstream 5.0kb downstream 5000 false chr4: 6902242-6907241 Medicago truncatula
Medtr4g021290 10.0kb upstream 10.0kb upstream 11935 true chr4: 6890307-6902241 Medicago truncatula
Medtr4g021290 10.0kb upstream 10.0kb upstream 10000 false chr4: 6890307-6900306 Medicago truncatula
Medtr4g021290 10.0kb downstream 10.0kb downstream 11935 true chr4: 6900307-6912241 Medicago truncatula
Medtr4g021290 10.0kb downstream 10.0kb downstream 10000 false chr4: 6902242-6912241 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301717 5265 Fabidae View MSA
124071399 5270 Rosid View MSA
123748066 5271 Pentapetalae View MSA
122790013 5272 Eudicot View MSA
122042868 5273 Angiosperm View MSA
121345250 5274 Embryophyte View MSA
123426931 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.187     High  
cufflinks 61.516     High Low
cufflinks 62.897     High Low
cufflinks 315.224     High High
cufflinks 101.443     High  
cufflinks 316.403     High High
cufflinks 136.824     High  
cufflinks 78.221     High  
cufflinks 193.636     High  

0 Strain