Gene : Medtr4g028130 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23336//PTHR23336:SF24 - ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. Description:  AP2/B3 transcription factor family protein
Genomic Order:  1267 Name:  ? Medtr4g028130
Secondary Identifier:  ? PAC:31113564
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g028130 0.5kb upstream 0.5kb upstream 7809 true chr4: 9696919-9704727 Medicago truncatula
Medtr4g028130 0.5kb upstream 0.5kb upstream 500 false chr4: 9696919-9697418 Medicago truncatula
Medtr4g028130 0.5kb downstream 0.5kb downstream 7809 true chr4: 9697419-9705227 Medicago truncatula
Medtr4g028130 0.5kb downstream 0.5kb downstream 500 false chr4: 9704728-9705227 Medicago truncatula
Medtr4g028130 1.0kb upstream 1.0kb upstream 8309 true chr4: 9696419-9704727 Medicago truncatula
Medtr4g028130 1.0kb upstream 1.0kb upstream 1000 false chr4: 9696419-9697418 Medicago truncatula
Medtr4g028130 1.0kb downstream 1.0kb downstream 8309 true chr4: 9697419-9705727 Medicago truncatula
Medtr4g028130 1.0kb downstream 1.0kb downstream 1000 false chr4: 9704728-9705727 Medicago truncatula
Medtr4g028130 2.0kb upstream 2.0kb upstream 9309 true chr4: 9695419-9704727 Medicago truncatula
Medtr4g028130 2.0kb upstream 2.0kb upstream 2000 false chr4: 9695419-9697418 Medicago truncatula
Medtr4g028130 2.0kb downstream 2.0kb downstream 9309 true chr4: 9697419-9706727 Medicago truncatula
Medtr4g028130 2.0kb downstream 2.0kb downstream 2000 false chr4: 9704728-9706727 Medicago truncatula
Medtr4g028130 5.0kb upstream 5.0kb upstream 12309 true chr4: 9692419-9704727 Medicago truncatula
Medtr4g028130 5.0kb upstream 5.0kb upstream 5000 false chr4: 9692419-9697418 Medicago truncatula
Medtr4g028130 5.0kb downstream 5.0kb downstream 12309 true chr4: 9697419-9709727 Medicago truncatula
Medtr4g028130 5.0kb downstream 5.0kb downstream 5000 false chr4: 9704728-9709727 Medicago truncatula
Medtr4g028130 10.0kb upstream 10.0kb upstream 17309 true chr4: 9687419-9704727 Medicago truncatula
Medtr4g028130 10.0kb upstream 10.0kb upstream 10000 false chr4: 9687419-9697418 Medicago truncatula
Medtr4g028130 10.0kb downstream 10.0kb downstream 17309 true chr4: 9697419-9714727 Medicago truncatula
Medtr4g028130 10.0kb downstream 10.0kb downstream 10000 false chr4: 9704728-9714727 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306915 5265 Fabidae View MSA
124062028 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.544       Low
cufflinks 0.713        
cufflinks 0.602        
cufflinks 0.909       High
cufflinks 0.558       Low
cufflinks 0.847        
cufflinks 1.018       High
cufflinks 0.573        
cufflinks 0.782        

0 Strain