Gene : Medtr4g031910 M. truncatula Mt4.0v1
Defline:  (1 of 33) PTHR11945:SF183 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Description:  MADS-box transcription factor family protein
Genomic Order:  1413 Name:  ? Medtr4g031910
Secondary Identifier:  ? PAC:31106950
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g031910 0.5kb upstream 0.5kb upstream 1190 true chr4: 10986257-10987446 Medicago truncatula
Medtr4g031910 0.5kb upstream 0.5kb upstream 500 false chr4: 10986257-10986756 Medicago truncatula
Medtr4g031910 0.5kb downstream 0.5kb downstream 1190 true chr4: 10986757-10987946 Medicago truncatula
Medtr4g031910 0.5kb downstream 0.5kb downstream 500 false chr4: 10987447-10987946 Medicago truncatula
Medtr4g031910 1.0kb upstream 1.0kb upstream 1690 true chr4: 10985757-10987446 Medicago truncatula
Medtr4g031910 1.0kb upstream 1.0kb upstream 1000 false chr4: 10985757-10986756 Medicago truncatula
Medtr4g031910 1.0kb downstream 1.0kb downstream 1690 true chr4: 10986757-10988446 Medicago truncatula
Medtr4g031910 1.0kb downstream 1.0kb downstream 1000 false chr4: 10987447-10988446 Medicago truncatula
Medtr4g031910 2.0kb upstream 2.0kb upstream 2690 true chr4: 10984757-10987446 Medicago truncatula
Medtr4g031910 2.0kb upstream 2.0kb upstream 2000 false chr4: 10984757-10986756 Medicago truncatula
Medtr4g031910 2.0kb downstream 2.0kb downstream 2690 true chr4: 10986757-10989446 Medicago truncatula
Medtr4g031910 2.0kb downstream 2.0kb downstream 2000 false chr4: 10987447-10989446 Medicago truncatula
Medtr4g031910 5.0kb upstream 5.0kb upstream 5690 true chr4: 10981757-10987446 Medicago truncatula
Medtr4g031910 5.0kb upstream 5.0kb upstream 5000 false chr4: 10981757-10986756 Medicago truncatula
Medtr4g031910 5.0kb downstream 5.0kb downstream 5690 true chr4: 10986757-10992446 Medicago truncatula
Medtr4g031910 5.0kb downstream 5.0kb downstream 5000 false chr4: 10987447-10992446 Medicago truncatula
Medtr4g031910 10.0kb upstream 10.0kb upstream 10690 true chr4: 10976757-10987446 Medicago truncatula
Medtr4g031910 10.0kb upstream 10.0kb upstream 10000 false chr4: 10976757-10986756 Medicago truncatula
Medtr4g031910 10.0kb downstream 10.0kb downstream 10690 true chr4: 10986757-10997446 Medicago truncatula
Medtr4g031910 10.0kb downstream 10.0kb downstream 10000 false chr4: 10987447-10997446 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298808 5265 Fabidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.859       High
cufflinks 0.078        
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.098        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain