Gene : Medtr4g032540 M. truncatula Mt4.0v1
Defline:  (1 of 59) PTHR11165 - SKP1 Description:  SCF ubiquitin ligase, SKP1 component
Genomic Order:  1451 Name:  ? Medtr4g032540
Secondary Identifier:  ? PAC:31114882
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g032540 0.5kb upstream 0.5kb upstream 1614 true chr4: 11209619-11211232 Medicago truncatula
Medtr4g032540 0.5kb upstream 0.5kb upstream 500 false chr4: 11209619-11210118 Medicago truncatula
Medtr4g032540 0.5kb downstream 0.5kb downstream 1614 true chr4: 11210119-11211732 Medicago truncatula
Medtr4g032540 0.5kb downstream 0.5kb downstream 500 false chr4: 11211233-11211732 Medicago truncatula
Medtr4g032540 1.0kb upstream 1.0kb upstream 2114 true chr4: 11209119-11211232 Medicago truncatula
Medtr4g032540 1.0kb upstream 1.0kb upstream 1000 false chr4: 11209119-11210118 Medicago truncatula
Medtr4g032540 1.0kb downstream 1.0kb downstream 2114 true chr4: 11210119-11212232 Medicago truncatula
Medtr4g032540 1.0kb downstream 1.0kb downstream 1000 false chr4: 11211233-11212232 Medicago truncatula
Medtr4g032540 2.0kb upstream 2.0kb upstream 3114 true chr4: 11208119-11211232 Medicago truncatula
Medtr4g032540 2.0kb upstream 2.0kb upstream 2000 false chr4: 11208119-11210118 Medicago truncatula
Medtr4g032540 2.0kb downstream 2.0kb downstream 3114 true chr4: 11210119-11213232 Medicago truncatula
Medtr4g032540 2.0kb downstream 2.0kb downstream 2000 false chr4: 11211233-11213232 Medicago truncatula
Medtr4g032540 5.0kb upstream 5.0kb upstream 6114 true chr4: 11205119-11211232 Medicago truncatula
Medtr4g032540 5.0kb upstream 5.0kb upstream 5000 false chr4: 11205119-11210118 Medicago truncatula
Medtr4g032540 5.0kb downstream 5.0kb downstream 6114 true chr4: 11210119-11216232 Medicago truncatula
Medtr4g032540 5.0kb downstream 5.0kb downstream 5000 false chr4: 11211233-11216232 Medicago truncatula
Medtr4g032540 10.0kb upstream 10.0kb upstream 11114 true chr4: 11200119-11211232 Medicago truncatula
Medtr4g032540 10.0kb upstream 10.0kb upstream 10000 false chr4: 11200119-11210118 Medicago truncatula
Medtr4g032540 10.0kb downstream 10.0kb downstream 11114 true chr4: 11210119-11221232 Medicago truncatula
Medtr4g032540 10.0kb downstream 10.0kb downstream 10000 false chr4: 11211233-11221232 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029820 5273 Angiosperm View MSA
122316717 5265 Fabidae View MSA
124041674 5270 Rosid View MSA
123756622 5271 Pentapetalae View MSA
122777748 5272 Eudicot View MSA
121299094 5274 Embryophyte View MSA
123428431 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain