Gene : Medtr4g032680 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10516//PTHR10516:SF292 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Description:  FKBP-type peptidyl-prolyl cis-trans isomerase
Genomic Order:  1460 Name:  ? Medtr4g032680
Secondary Identifier:  ? PAC:31114374
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g032680 0.5kb upstream 0.5kb upstream 10932 true chr4: 11270251-11281182 Medicago truncatula
Medtr4g032680 0.5kb upstream 0.5kb upstream 500 false chr4: 11270251-11270750 Medicago truncatula
Medtr4g032680 0.5kb downstream 0.5kb downstream 10932 true chr4: 11270751-11281682 Medicago truncatula
Medtr4g032680 0.5kb downstream 0.5kb downstream 500 false chr4: 11281183-11281682 Medicago truncatula
Medtr4g032680 1.0kb upstream 1.0kb upstream 11432 true chr4: 11269751-11281182 Medicago truncatula
Medtr4g032680 1.0kb upstream 1.0kb upstream 1000 false chr4: 11269751-11270750 Medicago truncatula
Medtr4g032680 1.0kb downstream 1.0kb downstream 11432 true chr4: 11270751-11282182 Medicago truncatula
Medtr4g032680 1.0kb downstream 1.0kb downstream 1000 false chr4: 11281183-11282182 Medicago truncatula
Medtr4g032680 2.0kb upstream 2.0kb upstream 12432 true chr4: 11268751-11281182 Medicago truncatula
Medtr4g032680 2.0kb upstream 2.0kb upstream 2000 false chr4: 11268751-11270750 Medicago truncatula
Medtr4g032680 2.0kb downstream 2.0kb downstream 12432 true chr4: 11270751-11283182 Medicago truncatula
Medtr4g032680 2.0kb downstream 2.0kb downstream 2000 false chr4: 11281183-11283182 Medicago truncatula
Medtr4g032680 5.0kb upstream 5.0kb upstream 15432 true chr4: 11265751-11281182 Medicago truncatula
Medtr4g032680 5.0kb upstream 5.0kb upstream 5000 false chr4: 11265751-11270750 Medicago truncatula
Medtr4g032680 5.0kb downstream 5.0kb downstream 15432 true chr4: 11270751-11286182 Medicago truncatula
Medtr4g032680 5.0kb downstream 5.0kb downstream 5000 false chr4: 11281183-11286182 Medicago truncatula
Medtr4g032680 10.0kb upstream 10.0kb upstream 20432 true chr4: 11260751-11281182 Medicago truncatula
Medtr4g032680 10.0kb upstream 10.0kb upstream 10000 false chr4: 11260751-11270750 Medicago truncatula
Medtr4g032680 10.0kb downstream 10.0kb downstream 20432 true chr4: 11270751-11291182 Medicago truncatula
Medtr4g032680 10.0kb downstream 10.0kb downstream 10000 false chr4: 11281183-11291182 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309562 5265 Fabidae View MSA
124063880 5270 Rosid View MSA
123749293 5271 Pentapetalae View MSA
122796238 5272 Eudicot View MSA
122047643 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121346019 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.015       High
cufflinks 0.572        
cufflinks 0.626        
cufflinks 0.228       Low
cufflinks 0.846       High
cufflinks 0.151       Low
cufflinks 0.397        
cufflinks 0.556        
cufflinks 0.328        

0 Strain