Gene : Medtr4g032390 M. truncatula Mt4.0v1
Defline:  (1 of 4) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Description:  nucleolar essential protein
Genomic Order:  1441 Name:  ? Medtr4g032390
Secondary Identifier:  ? PAC:31111366
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g032390 0.5kb upstream 0.5kb upstream 4764 true chr4: 11154228-11158991 Medicago truncatula
Medtr4g032390 0.5kb upstream 0.5kb upstream 500 false chr4: 11154228-11154727 Medicago truncatula
Medtr4g032390 0.5kb downstream 0.5kb downstream 4764 true chr4: 11154728-11159491 Medicago truncatula
Medtr4g032390 0.5kb downstream 0.5kb downstream 500 false chr4: 11158992-11159491 Medicago truncatula
Medtr4g032390 1.0kb upstream 1.0kb upstream 5264 true chr4: 11153728-11158991 Medicago truncatula
Medtr4g032390 1.0kb upstream 1.0kb upstream 1000 false chr4: 11153728-11154727 Medicago truncatula
Medtr4g032390 1.0kb downstream 1.0kb downstream 5264 true chr4: 11154728-11159991 Medicago truncatula
Medtr4g032390 1.0kb downstream 1.0kb downstream 1000 false chr4: 11158992-11159991 Medicago truncatula
Medtr4g032390 2.0kb upstream 2.0kb upstream 6264 true chr4: 11152728-11158991 Medicago truncatula
Medtr4g032390 2.0kb upstream 2.0kb upstream 2000 false chr4: 11152728-11154727 Medicago truncatula
Medtr4g032390 2.0kb downstream 2.0kb downstream 6264 true chr4: 11154728-11160991 Medicago truncatula
Medtr4g032390 2.0kb downstream 2.0kb downstream 2000 false chr4: 11158992-11160991 Medicago truncatula
Medtr4g032390 5.0kb upstream 5.0kb upstream 9264 true chr4: 11149728-11158991 Medicago truncatula
Medtr4g032390 5.0kb upstream 5.0kb upstream 5000 false chr4: 11149728-11154727 Medicago truncatula
Medtr4g032390 5.0kb downstream 5.0kb downstream 9264 true chr4: 11154728-11163991 Medicago truncatula
Medtr4g032390 5.0kb downstream 5.0kb downstream 5000 false chr4: 11158992-11163991 Medicago truncatula
Medtr4g032390 10.0kb upstream 10.0kb upstream 14264 true chr4: 11144728-11158991 Medicago truncatula
Medtr4g032390 10.0kb upstream 10.0kb upstream 10000 false chr4: 11144728-11154727 Medicago truncatula
Medtr4g032390 10.0kb downstream 10.0kb downstream 14264 true chr4: 11154728-11168991 Medicago truncatula
Medtr4g032390 10.0kb downstream 10.0kb downstream 10000 false chr4: 11158992-11168991 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303918 5265 Fabidae View MSA
124066897 5270 Rosid View MSA
123749345 5271 Pentapetalae View MSA
122789424 5272 Eudicot View MSA
122046063 5273 Angiosperm View MSA
121345370 5274 Embryophyte View MSA
123425050 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.217        
cufflinks 4.048        
cufflinks 5.317        
cufflinks 1.776        
cufflinks 7.27       High
cufflinks 0.866       Low
cufflinks 2.6        
cufflinks 4.761        
cufflinks 2.566        

0 Strain