Gene : Medtr4g025690 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31707:SF11 - PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED Description:  pectinesterase/pectinesterase inhibitor
Genomic Order:  1142 Name:  ? Medtr4g025690
Secondary Identifier:  ? PAC:31107265
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g025690 0.5kb upstream 0.5kb upstream 3176 true chr4: 8741991-8745166 Medicago truncatula
Medtr4g025690 0.5kb upstream 0.5kb upstream 500 false chr4: 8741991-8742490 Medicago truncatula
Medtr4g025690 0.5kb downstream 0.5kb downstream 3176 true chr4: 8742491-8745666 Medicago truncatula
Medtr4g025690 0.5kb downstream 0.5kb downstream 500 false chr4: 8745167-8745666 Medicago truncatula
Medtr4g025690 1.0kb upstream 1.0kb upstream 3676 true chr4: 8741491-8745166 Medicago truncatula
Medtr4g025690 1.0kb upstream 1.0kb upstream 1000 false chr4: 8741491-8742490 Medicago truncatula
Medtr4g025690 1.0kb downstream 1.0kb downstream 3676 true chr4: 8742491-8746166 Medicago truncatula
Medtr4g025690 1.0kb downstream 1.0kb downstream 1000 false chr4: 8745167-8746166 Medicago truncatula
Medtr4g025690 2.0kb upstream 2.0kb upstream 4676 true chr4: 8740491-8745166 Medicago truncatula
Medtr4g025690 2.0kb upstream 2.0kb upstream 2000 false chr4: 8740491-8742490 Medicago truncatula
Medtr4g025690 2.0kb downstream 2.0kb downstream 4676 true chr4: 8742491-8747166 Medicago truncatula
Medtr4g025690 2.0kb downstream 2.0kb downstream 2000 false chr4: 8745167-8747166 Medicago truncatula
Medtr4g025690 5.0kb upstream 5.0kb upstream 7676 true chr4: 8737491-8745166 Medicago truncatula
Medtr4g025690 5.0kb upstream 5.0kb upstream 5000 false chr4: 8737491-8742490 Medicago truncatula
Medtr4g025690 5.0kb downstream 5.0kb downstream 7676 true chr4: 8742491-8750166 Medicago truncatula
Medtr4g025690 5.0kb downstream 5.0kb downstream 5000 false chr4: 8745167-8750166 Medicago truncatula
Medtr4g025690 10.0kb upstream 10.0kb upstream 12676 true chr4: 8732491-8745166 Medicago truncatula
Medtr4g025690 10.0kb upstream 10.0kb upstream 10000 false chr4: 8732491-8742490 Medicago truncatula
Medtr4g025690 10.0kb downstream 10.0kb downstream 12676 true chr4: 8742491-8755166 Medicago truncatula
Medtr4g025690 10.0kb downstream 10.0kb downstream 10000 false chr4: 8745167-8755166 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310355 5265 Fabidae View MSA
124070854 5270 Rosid View MSA
123751128 5271 Pentapetalae View MSA
122793966 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.186        
cufflinks 0.066     Low Low
cufflinks 0.641        
cufflinks 29.651     High  
cufflinks 0.082       Low
cufflinks 54.337     High  
cufflinks 108.164     High High
cufflinks 0.19        
cufflinks 82.596     High High

0 Strain